Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3570 |
Symbol | |
ID | 6489715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3457947 |
End bp | 3458825 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642743693 |
Product | peptidase, U32 family |
Protein accession | YP_002047307 |
Protein GI | 194450375 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATT CCTTAGGACC GGTGCTTTAT TACTGGCCGA AAGAGACGCT GGAAGATTTT TATCAGCAGG CCGCAAAAAG CAGCGCTGAC GTCATTTATC TGGGCGAAGC GGTGTGCAGC AAGCGTCGCG CGACTAAAGT CGGCGACTGG CTGGAAATGG CGAAATCCCT CGCCGCCAGC GGTAAGCAGG TGGCTCTCTC CACCCTGGCG CTGGTACAGG CGTCATCTGA ATTAAGCGAG CTGAAACGCT ATGTGGACAA CGGCGATTTT CTGCTGGAAG CCAGCGATCT TGGCGTGGTG AATCTGTGCG CCGAGCGCAA ACTGCCGTTT GTCGCTGGCC ATGCGCTGAA CTGCTACAAC GCGGTCACGC TGCGCCGGTT GCTGAAAGAA GGCATGGTAC GCTGGTGTAT GCCAGTGGAG CTGTCTCGCG ACTGGCTGGT GAATTTGCTT AATCAGTGCG ATGAACTGGG CATCCGCAAT CAGTTTGAAG TGGAAGTGTT GAGCTACGGC CATCTGCCGC TGGCCTACTC CGCTCGCTGC TTTACCGCCC GTTCGGAAGA CCGTCCGAAA GATGAGTGCG AAACCTGCTG TATCAAGTAT CCAAACGGTC GTGACGTGCT CTCGCAAGAG AATCAGCAGG TGTTTGTGCT TAACGGTATT CAGACCATGA GCGGCTATGT CTATAACCTT GGCAACGAAC TGACATCAAT GCAGGGATTG GTCGATATCG TGCGCCTGTC GCCGTTGGGG ACGGAGACAT TTGCCATGCT TGATGCCTTT CGCGCTAACG AAAACGGCGG CGCACCATTA CCGCTTGCCG CCCATAGCGA CTGTAACGGC TACTGGAAGC GGCTGGCCGG GCTGGAGCTA CAGGCCTAG
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Protein sequence | MKYSLGPVLY YWPKETLEDF YQQAAKSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAAS GKQVALSTLA LVQASSELSE LKRYVDNGDF LLEASDLGVV NLCAERKLPF VAGHALNCYN AVTLRRLLKE GMVRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC FTARSEDRPK DECETCCIKY PNGRDVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL VDIVRLSPLG TETFAMLDAF RANENGGAPL PLAAHSDCNG YWKRLAGLEL QA
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