| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3539 |
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| Symbol | tdcB |
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| ID | 6491121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 3433745 |
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| End bp | 3434734 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642743667 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002047281 |
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| Protein GI | 194448631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00163646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACATTA CATACGATCT CCCGGTTGCA ATTGAAGATA TCCTCGAAGC GAAAAAAAGA
CTGGCGGGGA AGATATATAA AACGGGAATG CCTCGCTCTA ACTATTTTAG TGAACGTTGC
AAAGGCGAAA TATTTCTCAA GTTTGAAAAT ATGCAGCGTA CGGGTTCATT TAAAATTCGT
GGCGCTTTTA ACAAACTTAG CTCGTTAACG GAGGCGGAAA AACGTAAAGG CGTCGTGGCC
TGTTCCGCAG GTAATCATGC ACAGGGCGTT TCTCTTTCTT GCGCAATGCT GGGTATTGAC
GGCAAAGTCG TGATGCCGAA GGGCGCGCCA AAGTCAAAAG TGGCGGCCAC CTGTGATTAT
TCGGCGGAAG TGGTGCTCCA CGGTGACAAC TTCAATGACA CCATTGCTAA GGTGAGTGAA
ATTGTCGAAA CCGAAGGCCG CATTTTTATT CCGCCTTACG ACGATCCAAA AGTCATTGCC
GGGCAGGGCA CTATTGGTCT GGAAATTATG GAAGATCTGT ACGATGTCGA TAATGTCATC
GTGCCTATTG GCGGCGGCGG TTTAATTGCA GGTATTGCCA TTGCGATTAA ATCGATTAAC
CCGACCATTA AAGTTATCGG CGTACAGGCC GAAAATGTTC ACGGTATGGC GGCGTCTTAT
TACACTGGCG AAATAACCAC GCACCGAACG ACCGGCACCC TGGCGGATGG TTGTGATGTC
TCCCGCCCGG GTAATTTAAC CTATGAAATC GTTCGTGAAT TAGTCGATGA CATTGTCCTG
GTTAGCGAAG ATGAAATTCG TAACAGCATG ATCGCTTTAA TTCAGCGCAA TAAGGTTATT
ACTGAAGGCG CTGGCGCTCT GGCTTGCGCC GCACTATTAA GCGGGAAATT AGATAGCCAT
ATTCAGAACA GAAAAACGGT CAGTATTATT TCTGGCGGCA ATATCGATCT TTCTCGTGTA
TCACAAATTA CGGGTTTAGT TGACGCTTAA
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| Protein sequence | MHITYDLPVA IEDILEAKKR LAGKIYKTGM PRSNYFSERC KGEIFLKFEN MQRTGSFKIR
GAFNKLSSLT EAEKRKGVVA CSAGNHAQGV SLSCAMLGID GKVVMPKGAP KSKVAATCDY
SAEVVLHGDN FNDTIAKVSE IVETEGRIFI PPYDDPKVIA GQGTIGLEIM EDLYDVDNVI
VPIGGGGLIA GIAIAIKSIN PTIKVIGVQA ENVHGMAASY YTGEITTHRT TGTLADGCDV
SRPGNLTYEI VRELVDDIVL VSEDEIRNSM IALIQRNKVI TEGAGALACA ALLSGKLDSH
IQNRKTVSII SGGNIDLSRV SQITGLVDA
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