Gene SeHA_C3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3260 
Symbol 
ID6492247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3183090 
End bp3184460 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content50% 
IMG OID642743398 
Productgalacitol pts, eiic 
Protein accessionYP_002047015 
Protein GI194450195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3775] Phosphotransferase system, galactitol-specific IIC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0579049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TCACACAGTT TATCAATGAC CTGGGTAACT TTATTTTTAT ACCGGTCATT 
TTCCTTGTAC TGATGAAACT TCTGGGGCGT CCGCTGTCGG AGTGTATTTC ATCAGCCATT
AAAGTCGGCA TCGGTTTTAT TGCATTAACC ATGACCATCA AGCTGATGCT TGAAAAAATG
CAGCCAGCGG TGACAGGGCT TGCTGAGGCC ACCGGCTCCT CACTGAGCGC CATTGATGTT
GGTGGCGCAG CCACAGCAGT TATGGGTTTT GGCTCAAGCA TGGGGGCGAT AATTATTCCA
CTGTGCGTTG CCGTGAATAT TGCCATGCTG GTGGCCCGTT TGACGGACTG CGTAAACGTT
GACGTATTTA ACCTTCACCA AAATGCCTCA ATGGGAGCAA TCGTTGGAGT TTACTCCGGC
AGCTTCCTTT ACGGTGTTCT TACGGCTGCA TTGTTCCATG TCTGGGCGCT TATTGCGGCT
GACCTGGGTG CGAAAAACAA CGAAAAATTC TTCAACCTGC CAAAAGGCGT TGCCATCTCC
CACCCGGTTG CAAACACCTA TTTGCTGTTC GCTTATCCGT TTAACTGGAT ATACGATCGC
ATCCCTGGAT TCCGTAATCT GAACGTTACG GCGGAAAGCA TTCAGAAACG CTTTGGTATC
CTTGGCGATC CGACCATGGT TGGTTTCATT ATTGGTATTC TTCTTGGCTT CTGTGGTTAT
GGTTGGGAAT CTCCGTATCA CACCATTATC GCCAGCCTGC AGTTGGGTAT GTACCTTGCC
GCCGTGATGC TCCTGCTGCC GCGCATGACC TCAATCATGA TGGAAGGTCT GGTTCCGCTC
TCCAACGTGG CACGTAAGAA ACTGGTTAAA CGTTTCCCGG ATCGTGAGAT CACTGTCGGG
ATGGATACCG CACTGATAGT TGGTCATCCG TCCGTTATCG CGCCTGCACT GCTGCTGATC
CCGGTCATTG TTATCCTCGC CGTTGTCCTT CCCGGCAACC GAGTGATGCC GCTGGGGGAC
CTCTCACAGT TCGTATTCTT TATTGCGTGC ATGGTACCGG TTTTTAATGG CAACATTATT
CGTACCTGGG TGACTTCCAT CATCCTTTTT GGCGGCGGCT TATACATCGC ATCCTGGATG
GCTCCAGCAA CAAATGAAGT GTTTCAGAAA TTCGGCACTA ATCCTGATGC CAGCGTGATG
TACTCATCGC TTAACCCTTC AGCTAACCCG TTCACCGGAC TCTTTGCTGG ACTCAGCCAT
GTTGGCATCG CAGGTTATGC TCTCGCCGCT GTGTGGCTGT TGTCCGTAGG CTATTTACTC
AAACAGAAAG CACGCCGTCA GTTGAAAACT GAGGCAGAAA AAACGGCTTA A
 
Protein sequence
MELITQFIND LGNFIFIPVI FLVLMKLLGR PLSECISSAI KVGIGFIALT MTIKLMLEKM 
QPAVTGLAEA TGSSLSAIDV GGAATAVMGF GSSMGAIIIP LCVAVNIAML VARLTDCVNV
DVFNLHQNAS MGAIVGVYSG SFLYGVLTAA LFHVWALIAA DLGAKNNEKF FNLPKGVAIS
HPVANTYLLF AYPFNWIYDR IPGFRNLNVT AESIQKRFGI LGDPTMVGFI IGILLGFCGY
GWESPYHTII ASLQLGMYLA AVMLLLPRMT SIMMEGLVPL SNVARKKLVK RFPDREITVG
MDTALIVGHP SVIAPALLLI PVIVILAVVL PGNRVMPLGD LSQFVFFIAC MVPVFNGNII
RTWVTSIILF GGGLYIASWM APATNEVFQK FGTNPDASVM YSSLNPSANP FTGLFAGLSH
VGIAGYALAA VWLLSVGYLL KQKARRQLKT EAEKTA