Gene SeHA_C3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3258 
Symbol 
ID6490339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3181412 
End bp3182167 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content44% 
IMG OID642743396 
ProductDeoR family transcriptional regulator 
Protein accessionYP_002047013 
Protein GI194448395 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000943791 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGG TTGAAGAAAG GAGAAAATTG ATCCTTGAAG AGATTATTTC GGCGGGTACC 
GTGTACGTTA GCGATCTTGC TAAAAAGTAT GAGGTCACTT ATGAAACCAT CCGCAAAGAT
CTCACCCATC TTGAAAAAAA AGGGCTGCTG GTTAAAAGCC ATGGAGGTGC AACCTTAAAG
CAGGGGGCGG TCGAACATCC TTTCCAGGTC AGGGAAAAAG AAAACAGTAC TTTCAAACAA
GCTATAGCCA GAAAAGCGCT GGATTTTATC CCCCCCAATA GCTCAATGAT TATTGGTACC
GGGAGTTCTA ACTATGAACT GGCTAATCTG TTGTGCATGA AATCTGGCTT TAAAATTTTT
ACCGATTCTT TGCCGGTGGC CAGTGTGCTG ATCGAGTCAG ATAACCAGGT CTTTTTGTTC
GGCGGAGAAC TGAGGAAAAA AAGCTCTTCT GTCTTTGGTG GGTGGGCTGT GTCAATGATT
AATGATATTA ACGTTGATCT ATGCTTTATC GGCACTGATG GTTTCAACAA TATGACGGGC
CCGTCCACTC CGTCCTCCTC AGATGCCTTT TTGGATCGAA CGATCATTGC CCATTCCGAG
AAGAAATATA TCCTGGGCGA TTACACTAAG TTCCAGCGCA GCAGCTTATT TAAGATCTGC
GACTGGTCTG AGATTACCGC ACTGATCACT AATGATATTG CTGATAAAGA CGGTATTGCC
GAAGTTGCGA AACATACAAC AGTGATAACC TGTTGA
 
Protein sequence
MYLVEERRKL ILEEIISAGT VYVSDLAKKY EVTYETIRKD LTHLEKKGLL VKSHGGATLK 
QGAVEHPFQV REKENSTFKQ AIARKALDFI PPNSSMIIGT GSSNYELANL LCMKSGFKIF
TDSLPVASVL IESDNQVFLF GGELRKKSSS VFGGWAVSMI NDINVDLCFI GTDGFNNMTG
PSTPSSSDAF LDRTIIAHSE KKYILGDYTK FQRSSLFKIC DWSEITALIT NDIADKDGIA
EVAKHTTVIT C