Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3233 |
Symbol | kduD |
ID | 6491265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3160213 |
End bp | 3160974 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642743371 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_002046988 |
Protein GI | 194447782 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.0000782926 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTTTGA ATGCATTTTC TCTTGAAGGT AAAGTCGCGG TTGTGACGGG GTGCGATACC GGATTGGGGC AAGGGATGGC GTTAGGGCTG GCGGAAGCGG GCTGTGACAT TGTCGGTATT AACGTTGTTG AACCGACGGA AACTATTGCG CGCGTCACCG CTCTGGGACG TCGTTTTTTA AGCCTGACAG CCGATCTGCG TCAAATCGAT GGCATTCCGG CGCTACTGGA ACGGGCGGTG GCGGAATACG GTCATATTGA TATTCTGGTG AATAACGCGG GTTTGATCCG TCGTGAAGAT GCGATTGATT TCACGGAAAA AGACTGGGAT GACGTCATGA ACCTGAACAT CAAGAGCGTG TTCTTTATGT CTCAGGCGGC GGCAAAACTT TTTATTGCCC AGGGCAACGG CGGCAAAATT ATTAATATCG CGTCTATGCT CTCCTTCCAG GGCGGCATTC GCGTTCCGTC TTATACCGCG TCGAAAAGCG GCGTAATGGG AATAACGCGT CTGATGGCGA ACGAGTGGGC GAAACACAAT ATCAATGTAA ACGCCATCGC GCCGGGCTAT ATGTCCACGA ATAATACCCA GCAATTGCGC GCTGATGCAC AACGTAGCGC CGAAATTCTC GACCGTATTC CGGCTGGACG TTGGGGGCTA CCGGGCGATT TAATGGGGCC GGTAGTCTTC CTGGCATCCA GCGCCGCTGA TTATGTTAAC GGCTATACCA TAGCGGTAGA TGGCGGTTGG CTGGCGCGTT AA
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Protein sequence | MILNAFSLEG KVAVVTGCDT GLGQGMALGL AEAGCDIVGI NVVEPTETIA RVTALGRRFL SLTADLRQID GIPALLERAV AEYGHIDILV NNAGLIRRED AIDFTEKDWD DVMNLNIKSV FFMSQAAAKL FIAQGNGGKI INIASMLSFQ GGIRVPSYTA SKSGVMGITR LMANEWAKHN INVNAIAPGY MSTNNTQQLR ADAQRSAEIL DRIPAGRWGL PGDLMGPVVF LASSAADYVN GYTIAVDGGW LAR
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