Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3179 |
Symbol | |
ID | 6488919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3104758 |
End bp | 3106125 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642743322 |
Product | L-serine ammonia-lyase |
Protein accession | YP_002046941 |
Protein GI | 194451544 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.434034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGCG TATTCGATAT TTTTAAAATC GGCATTGGCC CTTCCAGTTC TCACACCGTC GGACCAATGA AAGCAGGCAA GCAGTTCACG GACGATCTGA TTGCCCGCCA TATTCTTACA GATGTCACCC GCGTCGTGGT GGATGTCTAC GGCTCTCTGT CATTGACGGG TAAAGGCCAC CACACTGATA TCGCCATTAT TATGGGCCTG GCGGGGAATC TGCCGGACAC CGTCGATATC GACGCCATTC CGTCCTTTAT CCAGGATGTG AACACCCATG GGCGTTTACT ACTGGCTAAT GGGCAGCATG AAGTCGAATT TCCGGTCGAT AAGTGCATGA ATTTCCACGC CGACAACCTG TCTCTGCATG AGAACGGGAT GCGTATTACC GCGCTGGCGG GCGATAAGGT GCTCTACAGC CAAACCTACT ACTCCATCGG CGGCGGCTTT ATCGTCGATG AAGAGCACTT TGGTTTGACG AATAGCGAAC CCGTTAACGT ACCGTACCCT TACAAAACCG CCGCGGATTT ACAGCGCCAC TGCCAGGAGA CGGGTTTGTC GCTCTCCGGT CTGATGATGC AAAACGAACT GGCTCTGCAC AGTAAAGAAG CGCTGGAGCA GCACTTCGCC AGGGTCTGGG AGGTAATGCG CAGCGGTATT GAGCGCGGTA TCACCACCGA GGGCGTATTG CCGGGCAAAC TGCGCGTTCC GCGTCGCGCG GCGGCGCTGC GTCGGGTGCT GGTCAGTCAG GATAAGACAA CCACCGATCC GATGGCGGTC GTCGACTGGA TCAATATGTT CGCTCTGGCG GTGAACGAAG AGAATGCCGC AGGCGGACGA GTAGTCACTG CCCCGACTAA CGGCGCATGT GGTATTGTTC CGGCGGTGCT GGCGTACTAT GACAAGTTTA TCCGCGAAGT AAATGCTAAC TCGCTTGCTC GCTATATGCT GGTCGCCAGC GCGATTGGCT CGCTGTATAA GATGAACGCC TCTATTTCCG GCGCCGAAGT GGGTTGTCAG GGAGAGGTCG GCGTGGCCTG TTCCATGGCG GCAGCGGGTC TGGCCGAGCT GCTGGGCGGT AGTCCGGCGC AGGTGTGTAT CGCCGCAGAA ATCGCCATGG AGCATAATCT GGGGTTAACT TGCGATCCGG TTGCCGGTCA GGTACAGGTT CCCTGCATTG AGCGTAACGC AATTGCTTCA GTCAAAGCGG TCAACGCCGC GCGTATGGCG CTGCGCCGTA CCAGCGAACC GCGTGTATGC CTCGATAAAG TGATTGAGAC CATGTACGAA ACCGGTAAAG ACATGAACGC TAAGTACCGC GAAACTTCGC GCGGCGGCCT GGCGATGAAG ATCGTTACCT GCGATTAA
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Protein sequence | MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARHILT DVTRVVVDVY GSLSLTGKGH HTDIAIIMGL AGNLPDTVDI DAIPSFIQDV NTHGRLLLAN GQHEVEFPVD KCMNFHADNL SLHENGMRIT ALAGDKVLYS QTYYSIGGGF IVDEEHFGLT NSEPVNVPYP YKTAADLQRH CQETGLSLSG LMMQNELALH SKEALEQHFA RVWEVMRSGI ERGITTEGVL PGKLRVPRRA AALRRVLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY DKFIREVNAN SLARYMLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAVNAARMA LRRTSEPRVC LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVTCD
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