| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3155 |
|---|
| Symbol | |
|---|
| ID | 6491308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3080190 |
|---|
| End bp | 3080696 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642743299 |
|---|
| Product | fimbrial subunit |
|---|
| Protein accession | YP_002046918 |
|---|
| Protein GI | 194450727 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.201472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGT TGACTCGCTG GAAAATGCTG GTGCTGCTGT GCGGTGGATT CGTTGCCGGC
ACCGAGGCTG CCGGCACAAA AACCGTGCAA CTGGAGCTGC ATCTGGTCGT CACTCAACCA
CCGCCCTGTA CGGTAGGCGG CGCTTCCGTA GAGTTTGGCG ATGTCCTGAC CACCAAAGTT
GGCGATGCTT CTCAAACGAA ACCTGTGGGC TACAGCCTGA ACTGCGATGG CAGAGCGAGT
GACTATCTGA AGCTACAAAT TCAGGGGACC ACCACCACCA TCAGCGGGGA GCAGGTTCTG
CAAACTTCGG TGCAGGGGTT AGGCATCCGT ATTCAGCAGG CGGGCAATAA GCAACTGGTT
CCGGTTGGCA TAACGGATTG GCTGAACTTC ACCCTGAGCG GCAGCAATGG GCCGGAGCTG
GAAGCCGTAC CGGTTAAAGA GCCCAGCACG CAGTTAGCGG GTGGCGATTT TAACGCCAGT
GCGACATTAG TCGTGGATTA CCAGTGA
|
|---|
| Protein sequence | MTMLTRWKML VLLCGGFVAG TEAAGTKTVQ LELHLVVTQP PPCTVGGASV EFGDVLTTKV
GDASQTKPVG YSLNCDGRAS DYLKLQIQGT TTTISGEQVL QTSVQGLGIR IQQAGNKQLV
PVGITDWLNF TLSGSNGPEL EAVPVKEPST QLAGGDFNAS ATLVVDYQ
|
|---|
| |