Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3132 |
Symbol | cas1 |
ID | 6489479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3053269 |
End bp | 3054189 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642743277 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_002046896 |
Protein GI | 194448225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTCG TGCCGCTCAA CCCGATCCCG TTAAAAGATC GAACCTCAAT GATCTTCCTC CAGTACGGTC AGATTGACGT GCTGGATGGG GCATTCGTGC TGATCGATAA AACGGGAATC CGCACGCATA TTCCCGTTGG TTCGGTCGCT TGTATCATGC TGGAACCGGG AACGCGGGTT TCCCATGCGG CTGTGCGTCT GGCATCGACG GTGGGAACGC TGTTGGTGTG GGTGGGCGAG GCGGGAGTGC GGGTTTATTC CTCCGGACAA CCCGGCGGCG CACGAGCCGA TAAGTTGCTT TATCAGGCAA AGCTGGCGTT AGATGATGAC CTGCGGCTGA AGGTGGTGCG CAAAATGTAT GAACTGCGTT TTCGCGAACC GCCGCCCGCC CGTCGTTCCG TTGAGCAACT GCGCGGTATT GAAGGATCCC GTGTGCGGGC GACCTATGCA TTGCTGGCGA AGCAGTATGG CGTGAAGTGG CATGGTCGTA ACTATGATCC GAAAGACTGG GAGAAGGGGG ATGTCGTCAA CCGATGTATT AGCGCGGCGA CATCGTGCCT GTACGGGATT TCAGAAGCGG CTATCCTGGC GGCGGGATAT GCGCCAGCTA TCGGTTTTAT CCATAGTGGT AAGCCGCTTT CTTTTGTTTA TGACATTGCC GATATCATCA AATTTGAATC GGTGGTGCCC AAAGCATTTG AGATCGCTGC TCGTCACCCG GCGGAACCTG ATAAAGAAGT GCGCCTGGCC TGCCGTGATA TTTTTCGCAG TTCGAAGCTG ACCGGAAAAT TGATCCCACT GATCGAAGAG GTGCTCGCTG CCGGTGAAAT TGAACCACCT CAGCCTGCGC CGGATATGTT GCCGCCAGCA ATACCGGAAC CTGAATCACT GGGTGATAGC GGCCATCGGG GGCATGGTTG A
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Protein sequence | MTFVPLNPIP LKDRTSMIFL QYGQIDVLDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV SHAAVRLAST VGTLLVWVGE AGVRVYSSGQ PGGARADKLL YQAKLALDDD LRLKVVRKMY ELRFREPPPA RRSVEQLRGI EGSRVRATYA LLAKQYGVKW HGRNYDPKDW EKGDVVNRCI SAATSCLYGI SEAAILAAGY APAIGFIHSG KPLSFVYDIA DIIKFESVVP KAFEIAARHP AEPDKEVRLA CRDIFRSSKL TGKLIPLIEE VLAAGEIEPP QPAPDMLPPA IPEPESLGDS GHRGHG
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