| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3048 |
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| Symbol | |
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| ID | 6489760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 2978231 |
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| End bp | 2980294 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642743203 |
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| Product | formate hydrogenlyase transcriptional activator |
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| Protein accession | YP_002046822 |
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| Protein GI | 194451461 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.00396389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATC TTGGACAGCA AGGCTTGTTC GATATCACTC GTACCTTATT GCAGCAGCCC
GATTTGGCGT CGCTCAGTGA AGCGCTTTCG CAACTGGTAA AGCGTTCAGC GCTCGCCGAC
AGCGCCGGCA TTGTGCTATG GCAGGCGCAG TCGCAACGCG CACAATATTA TGCGACGCGA
GAAAATGGCC GTCCTGTTGA ATATGAAGAT GAAACCGTAC TGGCGCACGG CCCGGTACGT
CGCATCCTTT CTCGCCCCGA TGCATTGCAC TGTAATTTCC ATGAGTTTAC CGAAACCTGG
CCGCAGCTTA CCGCGAGCGG CCTCTACCCT GAATTTGGTC ATTACTGTCT GCTTCCTTTA
GCCGCGGAGG GCCGTATTTT CGGCGGCTGC GAATTCATCC GTCAGGAAGA TCGCCCCTGG
AGTGAAAAGG AATATGACCG TCTGCATACG TTTACCCAAA TTGTCGGCGT GGTCGCCGAG
CAAATTCAAA ACCGGGTAAA CAATAATGTC GATTATGATC TGTTGTGCCG CGAACGCGAT
AACTTCCGTA TTCTGGTTGC GATCACCAAC GCCGTCCTGT CGCGTCTGGA TATTGATGAG
CTGGTAAGCG AAGTCGCAAA AGAGATCCAC CACTATTTCA ATATCGACGC GATCAGCATC
GTGTTGCGCA GCCATCGCAA AAATAAGCTG AATATCTACT CCACCCACTA CCTTGATGAG
CATCATCCGG CGCACGAACA GAGCGAAGTC GACGAAGCCG GCACGCTCAC GGAGCGCGTC
TTTAAAAGTA AAGAGATGCT GCTTATCAAC CTCAACGAAC GCGATCCGCT TGCTCCCTAC
GAACGCATGC TGTTCGATAC CTGGGGCAAT CAGATCCAGA CGCTTTGCCT GCTGCCGTTG
ATGTCCGGCA AGACGATGCT TGGCGTGCTC AAACTGGCCC AGTGCGAAGA AAAAGTGTTT
ACCACCGCCA ACCTCAAGCT GCTGCGTCAG ATTGCCGAAC GAGTAGCCAT TGCCGTGGAT
AATGCGCTGG CCTATCAGGA AATCCACCGA CTGAAGGAAC GCCTGGTCGA CGAAAACCTG
GCGCTCACGG AGCAGCTTAA TAACGTCGAC AGCGAGTTTG GCGAGATCAT CGGGCGCAGC
GAAGCGATGT ACAACGTGCT AAAGCAGGTT GAGATGGTGG CGCAGAGCGA CAGTACCGTG
CTGATTCTGG GCGAAACGGG AACCGGTAAA GAGTTGATTG CCCGCGCCAT TCACAACCTG
AGCGGACGTA GCGGGCGCAG GATGGTAAAG ATGAACTGCG CCGCGATGCC GGCGGGGCTG
CTGGAAAGCG ATTTGTTTGG TCATGAGCGC GGCGCGTTTA CCGGCGCCAG CGCGCAGCGG
ATTGGCCGTT TCGAGCTGGC GGATAAAAGC TCGCTGTTTC TGGATGAAGT GGGCGACATG
CCGCTGGAGC TACAGCCTAA GCTGCTGCGC GTCCTTCAGG AGCAAGAGTT TGAACGTCTC
GGCAGCAATA AACTGATCCA GACCGACGTG CGGCTGATCG CCGCGACTAA CCGCGATCTG
AAAAAAATGG TCGCCGATCG CGAATTCCGT AACGATCTCT ACTATCGGCT GAATGTTTTT
CCGATCCAGC TTCCTCCGTT GCGCGAACGT CCGGAAGATA TTCCACTACT GGTCAAAGCG
TTCACTTTCA AAATCGCCCG CCGAATGGGG CGTAATATCG ACAGCATTCC CGCCGAAACG
CTGCGCACGC TTAGCAGCAT GGAATGGCCG GGGAACGTTC GCGAGCTGGA GAATGTCGTC
GAGCGCGCCG TGCTGCTGAC GCGCGGCAAT GTGCTACAAC TGTCGCTGCC GGATATTACC
GCCGTAACGC CCGATACCTC GCCTGTTGCG ACTGAAAGCG CCAAAGAAGG CGAAGATGAA
TATCAGCTTA TTATACGCGT GCTGAAAGAG ACCAATGGCG TAGTGGCTGG ACCAAAAGGC
GCGGCGCAGC GTCTGGGGCT TAAACGAACC ACCCTGCTGT CGCGTATGAA GCGATTGGGT
ATTGATAAAG ACGCGTTAGC GTAA
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| Protein sequence | MSDLGQQGLF DITRTLLQQP DLASLSEALS QLVKRSALAD SAGIVLWQAQ SQRAQYYATR
ENGRPVEYED ETVLAHGPVR RILSRPDALH CNFHEFTETW PQLTASGLYP EFGHYCLLPL
AAEGRIFGGC EFIRQEDRPW SEKEYDRLHT FTQIVGVVAE QIQNRVNNNV DYDLLCRERD
NFRILVAITN AVLSRLDIDE LVSEVAKEIH HYFNIDAISI VLRSHRKNKL NIYSTHYLDE
HHPAHEQSEV DEAGTLTERV FKSKEMLLIN LNERDPLAPY ERMLFDTWGN QIQTLCLLPL
MSGKTMLGVL KLAQCEEKVF TTANLKLLRQ IAERVAIAVD NALAYQEIHR LKERLVDENL
ALTEQLNNVD SEFGEIIGRS EAMYNVLKQV EMVAQSDSTV LILGETGTGK ELIARAIHNL
SGRSGRRMVK MNCAAMPAGL LESDLFGHER GAFTGASAQR IGRFELADKS SLFLDEVGDM
PLELQPKLLR VLQEQEFERL GSNKLIQTDV RLIAATNRDL KKMVADREFR NDLYYRLNVF
PIQLPPLRER PEDIPLLVKA FTFKIARRMG RNIDSIPAET LRTLSSMEWP GNVRELENVV
ERAVLLTRGN VLQLSLPDIT AVTPDTSPVA TESAKEGEDE YQLIIRVLKE TNGVVAGPKG
AAQRLGLKRT TLLSRMKRLG IDKDALA
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