Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3028 |
Symbol | hypF |
ID | 6490870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2962248 |
End bp | 2964488 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642743183 |
Product | [NiFe] hydrogenase maturation protein HypF |
Protein accession | YP_002046802 |
Protein GI | 194451590 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.0000447787 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC GATTACACGG CGACGTGTGT AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGAAC CGTCGCAATT TATTGCCGCG CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGGTA TGGGAGCGCG CGCCGACGGA TTTCGCTATT CGTCAGAGCG CAGGCGGTTC GATGAACACG CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCAGGC GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GTGGACCACG CTTCACCATT ATTCGTGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG AGGCGTTTCC CTTGTGTCCG GAATGCGACA GCGAATACCG CGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCCGGAG GCATTATTGC CGTTAAAGGG CTGGGTGGTT TTCATCTGGC CTGCGACGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG GCGCGTAAAC ATCGTCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG CCGACCGCGG CGCGTTCGCT GCTGACCACG CCAGCGGCCC CGATTGTACT GGTGGATAAG CAGTATGTAC CTTCGCTGAG TGAGGGCATC GCGCCAGGAC TTACGGAAGT GGGCGTGATG CTGCCAGCCA ACCCATTGCA ACATCTCTTG TTGCAGGCAC TCAATTACCC GCTGGTGATG ACATCCGGCA ACCTGAGCGG CAAACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT TTACACGATA TTGCCGATGG TTTTCTGTTG CATAATCGCG ACATTGTACA GCGCATGGAC GACTCTGTCG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCGG TTGTCAGCCA ACATTTGGGC GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTCT GATCCAGTCA ATCTACGATT TTACGCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT CAGTGGGCCA GTGAGATGCG TCTGCCGACA GAGACGGTGT TACACCATCA TGCCCATGCG GCGGCTTGCC TGGCCGAGCA TGGTTGGCCG CTGGACGGTG GAGAGGTGAT TGCCCTGACG GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC AATTATCGCG AGTGCGAACA TTTAGGCGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT CTGGCTGCCA AACATCCGTG GCGTAATCTG TTGGCGCAGT GCCTGCGCTT TGTGCCGGAC TGGCAGGATT ATCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAATGT CCTGGCGCGC GCCATTGAGC GCGGCGTCAA TGCCCCATTG GCGTCTTCCT GCGGGCGGTT GTTTGACGCG GTGGCTGCCG CGCTTCGCTG CGCGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGGCAAT GGTTGAACTG GCAGGCCACG CCCGCGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTGATACAC AACCGCTTAC TTCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG CAGCGGTTAC CGGCGGGCGA CGGCGGGCTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG CGAGCGTTAA GGGAAGTGTA G
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Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLRLHGDVC NDGDGVVVRL LEEPSQFIAA LYQDCPPLAR IDSVEHASLV WERAPTDFAI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMEAFPLCP ECDSEYRDPY DRRFHAQPVA CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR ARKHRPAKPL AVMLPTAQTL PTAARSLLTT PAAPIVLVDK QYVPSLSEGI APGLTEVGVM LPANPLQHLL LQALNYPLVM TSGNLSGKPP AITNEQALDD LHDIADGFLL HNRDIVQRMD DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD LAAKHPWRNL LAQCLRFVPD WQDYPETAGL QQQNWNVLAR AIERGVNAPL ASSCGRLFDA VAAALRCAPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT PAQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP QRLPAGDGGL SFGQGVIAAA RALREV
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