| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2986 |
|---|
| Symbol | |
|---|
| ID | 6488698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2925662 |
|---|
| End bp | 2926096 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642743142 |
|---|
| Product | alkylhydroperoxidase AhpD family core domain-containing protein |
|---|
| Protein accession | YP_002046766 |
|---|
| Protein GI | 194447326 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.0876914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAA CGTTACGCCA ACCCTATTAT GAACTGAGCC CGGAGGTTTA TAGCGCTCTG
GTGCAGGCGA AAAACGCGCT GGAAAAGAGC ACGCTTGACC TCACTCTGAT GGAGCTGATT
TACCTACGTG TTTCGCAAAT AAATGGTTGT GCATTTTGCC TGGAGATGCA CAGTAAAGCG
CTGCGTAAGG CTGGCGTGAA TCAAGCTAAA TTAGATGCGC TGGCAGGATG GCGGGTAAGT
CACCATTTCA GCGAGCAAGA GTGCGCGGCG TTAGCCTGGG CGGAATCGGT GACGCACATT
GCTGAAACCC ACGCCGAAGA TAATGTTTAC CTGCCGCTGC TCGATCATTT CAGCGCGCGT
GAAATCAGCG ATCTGACCTT CGCCATCGGT TTAATGAACT GCTTTAACCG TCTGGCGATC
GGTATGCGAA TGTGA
|
|---|
| Protein sequence | MMTTLRQPYY ELSPEVYSAL VQAKNALEKS TLDLTLMELI YLRVSQINGC AFCLEMHSKA
LRKAGVNQAK LDALAGWRVS HHFSEQECAA LAWAESVTHI AETHAEDNVY LPLLDHFSAR
EISDLTFAIG LMNCFNRLAI GMRM
|
|---|
| |