Gene SeHA_C2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2853 
SymbolrseA 
ID6488757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2786943 
End bp2787593 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID642743021 
Productanti-RNA polymerase sigma factor SigE 
Protein accessionYP_002046648 
Protein GI194449405 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.639249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.372859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG AAAAACTTTC CGCTTTGATG GATGGCGAAA CGTTGGATAG TGAGCTGCTC 
AAAGCGCTTA CGCACGACCC GGAAATGCAG AAAACCTGGG AGAGTTATCA CCTGATCCGC
GATTCAATGC GGGGGGATAC GCCTGACGTT CTCCATTTCG ATATATCCGC TCGCGTGATG
GCCGCTATTG AAAACGAGCC AGTACGTCAG GTGTCGCCAT TAATCCCTGA GGCCCAACCC
GCTCCGCAGC AATGGCAGAA AATGCCGTTC TGGAAAAAAG TGCGTCCGTG GGCGGCGCAG
CTTACCCAAA TGGGCGTGGC GGCGTGCGTT TCACTTGCAG TTATCGTCGG TGTCCAGCAC
TATAATGGGC AATCTGAAAC ATCCCAACAA CCTGAAACGC CGGTTTTCAA TACCCTGCCT
ATGATGGGGA AAGCCAGCCC GGTAAGTCTG GGAGTGCCTT CTGAAGCAGC GCCTGTCGGC
AGTCAGCAAC AGCAGGTACA GGAGCAGCGT CGTCGCATTA ATGCCATGTT GCAGGACTAT
GAACTGCAGC GCCGACTGCA CTCCGAACAG CTTCAGTTTG AGCAGGCGCA AACCCAGCAA
GCCGCGGTAC AGGTGCCAGG AATCCAAACT TTAGGAACGC AATCGCAGTA A
 
Protein sequence
MQKEKLSALM DGETLDSELL KALTHDPEMQ KTWESYHLIR DSMRGDTPDV LHFDISARVM 
AAIENEPVRQ VSPLIPEAQP APQQWQKMPF WKKVRPWAAQ LTQMGVAACV SLAVIVGVQH
YNGQSETSQQ PETPVFNTLP MMGKASPVSL GVPSEAAPVG SQQQQVQEQR RRINAMLQDY
ELQRRLHSEQ LQFEQAQTQQ AAVQVPGIQT LGTQSQ