Gene SeHA_C2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2813 
Symbol 
ID6491707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2746021 
End bp2747007 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content58% 
IMG OID642742985 
Producthigh-affinity nickel-transporter 
Protein accessionYP_002046612 
Protein GI194448932 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.774506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA TTTTTTCTCA ACGCACTCCG GGGCGACGCT GGCTCTCGCT GTGGCCATTG 
GCGTTATTCC TGCTGCTGAT GCTGGTTGGC GGTCTGTGGA TATGGCAGGC CTGGCCGCAG
GTGATGTTGA AAAGCGCTCT TTGGCAGCGG GACGTAAATC AGCAGTTGAG CGCGCTGCTT
AATGCGGTGG CGACGCATCC TGAGCGGGCG GGCGGATCGT TGCTTCTGCT GAGTTTTATG
TATGGCGTGC TTCATGCGCT GGGGCCGGGA CACGGCAAAG TGGTGATCGC GACATGGCTG
GCGACGCATC CTTCGAAGTT GAAATCGAGT ATCGTGTTAA CCCTCGCCGC CGCGTTATTA
CAGGGGCTCG TGGCTATCGG GTTGGTGGTG GGCGTGCTGA CCGTATTGCA ACTTCCGGCC
AGGCAGCTCC ATCTGAGCGG TTTCTGGCTG GAAAAGGGGA GCTATGCGTT AGTTGGCGGG
CTGGGCATCT TGCTGTGCTG GCGGGCCATA AAAAGGTTAC GCGCGCTGCT ACGTAAACCT
GTCTTTATCG CTTTTACGCC GCGCCATGTT CACCATGAAA AATGCGGCTG CGGACATCAG
CATTTACCGA CGCAGGAACA ATTGCATAGC GGCGATGACT GGCGCGCGCG ACTCATGATC
GTACTGTCTA TGGGGATGCG GCCCTGTTCC GGTGCGATAA TGGTGCTGTT ATTCAGTAAA
GTGATTGGCG TTTTTAGCTG GGGAATGGCG TCGGTACTGG CAATGGCGGC GGGAACCTCG
CTAACGATTA CCTCGCTGGC GCTGCTGGTA CACACTTTTC GTGCTCTGGC GGTGAAACTC
AGTGGAAACA AAGCGCCGGC GTTATGGCGG CAGGTAGGCT GGTCAACGCT GGCGCTGGCC
GGAGGGGTCA TACTGCTTGT CGCGGCGCTG GTCATGTGGT TTAGCGTGCC GCAGCCTGTG
GGCGGGCTGC GGCCATGGCG TGGTTGA
 
Protein sequence
MSVIFSQRTP GRRWLSLWPL ALFLLLMLVG GLWIWQAWPQ VMLKSALWQR DVNQQLSALL 
NAVATHPERA GGSLLLLSFM YGVLHALGPG HGKVVIATWL ATHPSKLKSS IVLTLAAALL
QGLVAIGLVV GVLTVLQLPA RQLHLSGFWL EKGSYALVGG LGILLCWRAI KRLRALLRKP
VFIAFTPRHV HHEKCGCGHQ HLPTQEQLHS GDDWRARLMI VLSMGMRPCS GAIMVLLFSK
VIGVFSWGMA SVLAMAAGTS LTITSLALLV HTFRALAVKL SGNKAPALWR QVGWSTLALA
GGVILLVAAL VMWFSVPQPV GGLRPWRG