Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2630 |
Symbol | fadJ |
ID | 6488772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2542876 |
End bp | 2545023 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642742809 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_002046443 |
Protein GI | 194451326 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00000000227424 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTACCA CATCAGCTTT TATGCTTAAC GTGCGTCTGG ATAATGTCGC GGTTGTCGCT ATTGATGTCC CTGGAGAAAA GGTGAACACC CTGAAAGCGG AGTTTGCCGC GCAGGTACGC GCCATCCTGA AGCAGATCCG GGAAAATAAA GCGTTGCAGG GCGTTGTTTT TATCTCAGCC AAAGCAGATA ACTTTATTGC TGGCGCTGAT ATCAACATGA TAGGTCACTG CCAAAACGCG CAGGAAGCGG AAACGCTGGC GCGTCAGGGG CAACAACTGA TGGCGGAGAT CCAGGCGTTG CCTGTTCCGG TTATCGCTGC CATTCACGGC GCCTGCCTGG GGGGCGGTCT TGAAATGGCG CTGGCCTGCC ATCGGCGTAT CTGTACCGAC GACGTTAAAA CCGTTCTCGG ACTGCCGGAG GTACAGTTAG GGCTTTTACC GGGATCGGGC GGAACGCAGC GACTTCCACG GCTGGTGGGG GTCAGTACCG CGCTGGATAT GATCCTGACA GGTAAACAGC TTCGCGCCAG ACAGGCGCTT AAAGCCGGGC TGGTTGATGA TGTGGTGCCG CAAACTATTT TACTGGAAGC GGCTGTCGAG CTGGCTAAAA AAGAACGCCT GGCGCAGCGG ACATTACCGG TCCGTGAACG TATCCTGGCG GGGCCGCTGG GGCGCGCGCT GTTATTTCGC CTGGTGCGTA AAAAGACAGC GCAAAAAACG CAGGGTAATT ATCCGGCGAC GGAGCGGATC ATTGATGTGA TTGAAACCGG ACTGGCGCAG GGCAGCAGTA GCGGCTATGA CGCGGAAGCG CGCGCTTTCG GCGAGCTGGC GATGACGCCT CAATCGCAGG CGCTGCGCGC TGTTTTCTTT GCCAGTACCG AGGTGAAAAA AGATCCCGGT AGCGATGCGC CGCCCGGCCC GCTGAACAGC GTGGGCATCT TAGGCGGCGG GTTAATGGGC GGCGGTATCG CCTGGGTTAC GGCCTGTAAA GGCGGTTTGC CAGTACGAAT TAAGGATATA AATACTCAGG GGATCAATCA TGCTCTGAAG TACAGCTGGG ATCTGCTTGA AACAAAAGTA CGCCGCCGCC ATATCAAAGC CAGCGAACGC GATAAACAGT TGGCGTTGAT ATCAGGTTCG ACCGATTACC GTGGTTTCAG TCATCGTGAT CTGGTCATTG AAGCGGTGTT TGAAGATCTG CCGTTAAAAC AACAGATGGT GGCGGAAGTG GAGCAAAATT GCGCTGCTCA CACCATTTTT GCCTCCAATA CTTCTTCCCT GCCGATTGGC GATATTGCGG CGAATGCGGC CAGACCGGAA CAGGTGATTG GATTGCACTT TTTTAGCCCG GTCGAAAAAA TGCCGCTGGT TGAGGTTATT CCTCATGCGT CTACTTCCGC GCAGACCATC GCCACGACCG TTAAGCTGGC GAAAAAACAG GGTAAAACCC CGATAGTCGT CAGTGATAAA GCCGGGTTTT ATGTTAACCG AATTCTTGCG CCGTATATCA ATGAGGCGAT TCGGATGCTG ACTGAAGGCG AACGCGTCGA ACATATTGAC GCCGCCCTGG TAAAATTTGG TTTTCCGGTG GGGCCAATCC AACTTTTGGA TGAGGTAGGA ATCGACACGG GCACTAAAAT TATTCCTGTG CTTGAGGCGG CGTATGGAGA ACGTTTTAGC GCGCCTGCAA ATGTTGTCGC TTCAATTTTG AATGACGATC GCAAAGGTAG AAAAAATGGT CGCGGTTTCT ATCTTTATGG CGAAAAAGGG CGTAAAAGCA AAAAACAGGT TGACCCTGCT ATTTATAAGC TTATTGGCGT GCAAGGGCAG AGTCGATTGT CTGCGCAGCA GGTGGCAGAG CGCTGTGTCA TGTTAATGCT TAACGAAGCG GCGCGCTGTT TCGACGAAAA AGTGATTCGC AGCGCGCGCG ATGGCGATAT CGGCGCCGTG TTTGGTATCG GTTTTCCGCC GTTTCTCGGT GGCCCGTTCC GCTATATGGA TGCTCTCGGG CCGGGTGAAA TGGTGGCGAC ATTACAGCGC CTGGCCGCAC TTTACGGTCC TCGTTACGCG CCTTGTGAAC AATTAGTGCG CATGGCGGAG CGCAGGGAGC ATTTCTGGAC GAATGGGGAA ACTGACCAGG GAAATTGA
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Protein sequence | MTTTSAFMLN VRLDNVAVVA IDVPGEKVNT LKAEFAAQVR AILKQIRENK ALQGVVFISA KADNFIAGAD INMIGHCQNA QEAETLARQG QQLMAEIQAL PVPVIAAIHG ACLGGGLEMA LACHRRICTD DVKTVLGLPE VQLGLLPGSG GTQRLPRLVG VSTALDMILT GKQLRARQAL KAGLVDDVVP QTILLEAAVE LAKKERLAQR TLPVRERILA GPLGRALLFR LVRKKTAQKT QGNYPATERI IDVIETGLAQ GSSSGYDAEA RAFGELAMTP QSQALRAVFF ASTEVKKDPG SDAPPGPLNS VGILGGGLMG GGIAWVTACK GGLPVRIKDI NTQGINHALK YSWDLLETKV RRRHIKASER DKQLALISGS TDYRGFSHRD LVIEAVFEDL PLKQQMVAEV EQNCAAHTIF ASNTSSLPIG DIAANAARPE QVIGLHFFSP VEKMPLVEVI PHASTSAQTI ATTVKLAKKQ GKTPIVVSDK AGFYVNRILA PYINEAIRML TEGERVEHID AALVKFGFPV GPIQLLDEVG IDTGTKIIPV LEAAYGERFS APANVVASIL NDDRKGRKNG RGFYLYGEKG RKSKKQVDPA IYKLIGVQGQ SRLSAQQVAE RCVMLMLNEA ARCFDEKVIR SARDGDIGAV FGIGFPPFLG GPFRYMDALG PGEMVATLQR LAALYGPRYA PCEQLVRMAE RREHFWTNGE TDQGN
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