Gene SeHA_C2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2554 
Symbol 
ID6490201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2468205 
End bp2469209 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID642742734 
ProductCheW protein 
Protein accessionYP_002046368 
Protein GI194447589 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.977607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATT TTCAGAAAGA TATTGATGAC AGGGCCAATT TAACCCTGTC CAACCGTTTT 
GAACTGCTGT TATTCCGTCT TGGTACATCG CTGCATGAAC AGAAGTCAGA GCTGTTCGGC
ATCAATGTAT TTAAGCTGCG CGAAATCGTA CCAATGCCCG CCTTTACGCG CCCGGCAGGC
ATGAAAGCGC CGCTATTGGG CATGGTCAAT ATTCGGGATC AGGTCATTCC GGTGATTGAT
TTGCCAGCGG TAGCGGGCTG CAAGCCGGAA ACCGGGCTGA ATATTTTGCT GATCACCGAA
TATGCGCGCA GCGTACAGGC ATTTGCCGTC GAGTCGGTGG AAAATATTAT GCGTCTTGAC
TGGCAACAGG TGCATACCGC CGAGAAAGCC GTCAACGGTC GCTACATCAC CAGTATTGCC
TGCCTGGATG ATAACAAAGA AACCAACAAC CTGGCGCTGG TGCTCGACGT TGAGCAGATC
CTTTATGATA TTGTCCCCTC CAGCCACGAT CTGCGCGCCA CCAATCTGAA GACCAATAAA
TTTTATATTA CCCCTGGCGC GGTAGCCATT GTGGCGGAAG ACTCCAAAGT CGCCCGCGCG
ATGCTGGAAA AAGGGCTGAA CGCGATGGGA ATTCCGCACC AGATGCATGT GACCGGCAAG
GATGCATGGG AGAGAATCCA GCAACTGGCG CAGGAAGCGG AGGCCGAAGG TAAGCCAATT
AGCGAGAAAA TCGCGCTAGT CCTGACAGAC CTTGAGATGC CGGAGATGGA TGGCTTTACG
TTAACGCGTA AAATTAAAAC CGATGAACGG CTGAAAAAGA TCCCGGTTGT TATTCATTCT
TCCCTTTCCG GCAGCGCCAA CGAAGATCAT GTGCGTAAGG TGAAAGCCGA CGGCTACGTG
GCCAAGTTTG AGATTAACGA ACTCTCTTCA GTGATACAGG AAGTGATGGA ACGCGCGGCG
CAAAACATCA GCGGCCCGCT GGTAAGCCGG CAGTTGCTAA GTTAA
 
Protein sequence
MDNFQKDIDD RANLTLSNRF ELLLFRLGTS LHEQKSELFG INVFKLREIV PMPAFTRPAG 
MKAPLLGMVN IRDQVIPVID LPAVAGCKPE TGLNILLITE YARSVQAFAV ESVENIMRLD
WQQVHTAEKA VNGRYITSIA CLDDNKETNN LALVLDVEQI LYDIVPSSHD LRATNLKTNK
FYITPGAVAI VAEDSKVARA MLEKGLNAMG IPHQMHVTGK DAWERIQQLA QEAEAEGKPI
SEKIALVLTD LEMPEMDGFT LTRKIKTDER LKKIPVVIHS SLSGSANEDH VRKVKADGYV
AKFEINELSS VIQEVMERAA QNISGPLVSR QLLS