Gene SeHA_C2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2359 
Symbol 
ID6492274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2269314 
End bp2270726 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content55% 
IMG OID642742546 
Productmultidrug efflux system protein MdtE 
Protein accessionYP_002046181 
Protein GI194448482 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC TTCCTGACAA CACCCGCTGG CAACTCTGGA TTGTGGCATT AGGCTTTTTT 
ATGCAGTCGC TGGATACCAC CATCGTCAAC ACTGCGCTGC CCTCCATGGC GAAAAGCCTG
GGGGAAAGCC CGCTGCATAT GCACATGGTA GTGGTGTCAT ATGTTCTTAC CGTCGCCGTG
ATGCTCCCCG CCAGCGGCTG GCTGGCAGAC AAAATCGGCG TGCGTAATAT TTTCTTTGCC
GCCATCGTGC TGTTCACGCT GGGTTCGCTG TTTTGCGCCC TCTCCGGTAC GCTTAATCAA
CTGGTATTAG CGCGAGTTTT ACAAGGCGTA GGCGGCGCGA TGATGGTGCC GGTCGGACGC
CTGACGGTCA TGAAAATCGT GCCGCGCGCG CAATATATGG CGGCGATGAC CTTCGTCACC
CTACCGGGAC AGATCGGGCC GTTACTCGGC CCCGCGCTGG GCGGGGTGCT GGTGGAATAT
GCTTCATGGC ACTGGATCTT TCTGATCAAT ATCCCGGTGG GAATTGTCGG CGCTATGGCG
ACCTTTATGC TGATGCCAAA CTACACCATA GAGACCCGGC GCTTTGATCT GCCGGGGTTC
CTGCTGTTAG CTATCGGCAT GGCGGTACTC ACGCTGGCGC TGGACGGTAG TAAAAGCATG
GGGATCTCGC CCTGGACATT AGCCGGACTT GCTGCGGGCG GCGCGGCAGC CATTCTGCTC
TATCTCCTCC ATGCCAAAAA AAACTCAGGC GCGTTATTCA GCCTGCGATT GTTCCGCACG
CCCACGTTTT CACTGGGGTT GCTGGGCAGT TTTGCCGGGC GTATCGGCAG CGGTATGCTG
CCGTTTATGA CGCCGGTCTT TTTGCAAATT GGTCTTGGTT TTTCACCGTT TCATGCCGGT
TTGATGATGA TCCCCATGGT GCTGGGCAGC ATGGGAATGA AGCGGATTGT GGTGCAGATA
GTTAACCGTT TTGGCTATCG TCGGGTTCTG GTGGCGACCA CGCTCGGACT GGCATTGGTT
AGCCTGTTGT TTATGTCGGT CGCGCTGCTC GGCTGGTATT ATCTCCTGCC GCTGGTACTG
CTTTTGCAGG GAATGGTGAA CTCGGCGCGC TTTTCTTCCA TGAATACCTT AACGCTAAAA
GACCTTCCCG ATACGCTGGC CAGCAGCGGC AATAGCTTAT TATCGATGAT TATGCAGCTC
TCGATGAGTA TCGGCGTCAC TATTGCCGGA ATGCTGCTGG GTATGTTTGG CCAACAGCAT
ATCGGGATAG ACAGTAGCGC CACACATCAC GTCTTTATGT ACACCTGGTT ATGTATGGCG
GTTATTATCG CGCTACCGGC GATAATTTTT GCCCGCGTGC CGAACGATAC ACAGCAAAAC
ATGGTCATTT CACGGCGTAA AAGGAGCCTG TAA
 
Protein sequence
MTELPDNTRW QLWIVALGFF MQSLDTTIVN TALPSMAKSL GESPLHMHMV VVSYVLTVAV 
MLPASGWLAD KIGVRNIFFA AIVLFTLGSL FCALSGTLNQ LVLARVLQGV GGAMMVPVGR
LTVMKIVPRA QYMAAMTFVT LPGQIGPLLG PALGGVLVEY ASWHWIFLIN IPVGIVGAMA
TFMLMPNYTI ETRRFDLPGF LLLAIGMAVL TLALDGSKSM GISPWTLAGL AAGGAAAILL
YLLHAKKNSG ALFSLRLFRT PTFSLGLLGS FAGRIGSGML PFMTPVFLQI GLGFSPFHAG
LMMIPMVLGS MGMKRIVVQI VNRFGYRRVL VATTLGLALV SLLFMSVALL GWYYLLPLVL
LLQGMVNSAR FSSMNTLTLK DLPDTLASSG NSLLSMIMQL SMSIGVTIAG MLLGMFGQQH
IGIDSSATHH VFMYTWLCMA VIIALPAIIF ARVPNDTQQN MVISRRKRSL