| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2356 |
|---|
| Symbol | |
|---|
| ID | 6492451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2261873 |
|---|
| End bp | 2263114 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642742543 |
|---|
| Product | multidrug efflux system subunit MdtA |
|---|
| Protein accession | YP_002046178 |
|---|
| Protein GI | 194451122 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.413766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA GTAATACTTT CCGCTGGGCA ATAGCGATTG GGGTTGTAGT GGCCGCCGCC
GCATTCTGGT TCTGGCATAG CCGTAGCGAA AGCCCGACCG CCGCGCCGGG CGTCGCCGCG
CAAGCGCCGC ATACCGCCGC CGCAGGTCGC CGTGGTATGC GCGACGGCCC TCTGGCGCCG
GTACAGGCCG CGACCGCGAC CACACAGGCC GTACCGCGCT ATCTGAGCGG GCTGGGTACC
GTGACCGCAG CGAATACCGT TACGGTGCGT AGCCGCGTGG ATGGTCAACT CATCGCCCTG
CACTTTCAGG AAGGTCAGCA GGTCAACGCA GGCGATCTGC TGGCGCAAAT CGATCCCAGC
CAGTTTAAGG TCGCCCTGGC GCAGGCTCAG GGACAGTTGG CGAAAGATAA CGCTACGCTG
GCGAATGCGC GTCGTGATCT GGCGCGCTAT CAACAACTGG CAAAAACCAA TCTGGTTTCC
CGTCAGGAAC TGGATGCGCA ACAGGCACTG GTCAACGAAA CCCAGGGAAC CATTAAAGCA
GATGAAGCCA ATGTCGCCAG CGCGCAGTTA CAGCTCGACT GGAGTCGTAT CACGGCCCCG
GTCTCGGGAC GCGTGGGTCT GAAACAGGTG GATGTCGGCA ACCAGATTTC CAGCAGCGAT
ACCGCAGGTA TTGTCGTCAT TACGCAAACG CACCCGATTG ATCTCATTTT TACTCTGCCG
GAAAGCGATA TCGCGACCGT GGTTCAGGCG CAGAAAGCGG GGAAAACGCT GGTCGTAGAA
GCCTGGGATC GGACTAACTC GCACAAATTG AGCGAAGGTG TGTTGCTCAG TCTGGACAAC
CAGATTGATC CCACGACGGG AACGATCAAA ATTAAAGCGC GCTTTACCAA TCAGGACGAT
ACGCTGTTCC CCAATCAATT TGTGAACGCC CGGATGCTGG TCGATACCGA ACAAAATGCC
GTTGTGGTGC CTGCCGCGGC GGTGCAAATG GGCAATGAGG GCCACTTTGT GTGGGTGCTG
AACGACGAAA ATAACGTCAG CAAGATGCGG GTAAAAATCG GTATTCAGGA TAACCAAAAC
GTGGTGATCA GCGCAGGCTT GTCGGCAGGC GATCGCGTCG TTACCGATGG TATTGATCGG
CTGACGGAAG GCGCAAAAGT CGAGGTCGTT GAGCCGCAAA CCACCATGGC GGATGAAAAA
TCCCCTTCCC GCCATGAAGG TCAAAAAGGA GCGCGCGCCT GA
|
|---|
| Protein sequence | MKGSNTFRWA IAIGVVVAAA AFWFWHSRSE SPTAAPGVAA QAPHTAAAGR RGMRDGPLAP
VQAATATTQA VPRYLSGLGT VTAANTVTVR SRVDGQLIAL HFQEGQQVNA GDLLAQIDPS
QFKVALAQAQ GQLAKDNATL ANARRDLARY QQLAKTNLVS RQELDAQQAL VNETQGTIKA
DEANVASAQL QLDWSRITAP VSGRVGLKQV DVGNQISSSD TAGIVVITQT HPIDLIFTLP
ESDIATVVQA QKAGKTLVVE AWDRTNSHKL SEGVLLSLDN QIDPTTGTIK IKARFTNQDD
TLFPNQFVNA RMLVDTEQNA VVVPAAAVQM GNEGHFVWVL NDENNVSKMR VKIGIQDNQN
VVISAGLSAG DRVVTDGIDR LTEGAKVEVV EPQTTMADEK SPSRHEGQKG ARA
|
|---|
| |