Gene SeHA_C2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2167 
Symbol 
ID6489546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2089709 
End bp2090377 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID642742363 
ProductL-cystine transport system permease TcyB 
Protein accessionYP_002046003 
Protein GI194450867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0765863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00000339309 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAA GTATCCAACT GGTTATTGAA TCGCTGCCGT ATTTGCTTAA AGGCGCCGTC 
TTTACCCTGC AACTGAGTAT TGGCGGTATG TTTTTTGGTC TGCTGCTGGG ATTTGTGCTG
GCGCTGATGC GGATGTCTCC GCTATGGCTG GTTCGCTGGC TGGCGCGCTT TTATATCTCG
ATTTTTCGCG GTACGCCGCT TATCGCCCAG TTATTTATGA TCTATTACGG CCTGCCGCAA
TTTGGGATTG AGCTGGACCC TATCCCGGCG GCGATGATTG GTTTATCGCT CAATACCGCG
GCTTACACGT CCGAGACGCT GCGCGCGGCG ATCTCGGCTA TCGACAAGGG GCAATGGGAA
GCGGCGGCGA GCATTGGCAT GACGCCGTGG CAAACGCTAC GCCGCGCTAT TTTGCCGCAG
GCGGCCCGCG TCGCGCTTCC GCCGTTGAGC AACAGCTTTA TCAGCCTGGT GAAAGATACG
TCGCTCGCCG CGACGATTCA GGTGCCGGAG TTGTTCCGCC AGGCGCAGTT AATTACCTCG
CGAACGCTGG AGGTGTTTAC CATGTATCTG GCCGCGTCGT TAATCTACTG GGTAATGGCG
ACCGTCTTAT CGGCACTGCA AAACTATTTT GAAAACCAGC TTAACCGCCA GGAGAGAGAG
CCAAAATGA
 
Protein sequence
MQESIQLVIE SLPYLLKGAV FTLQLSIGGM FFGLLLGFVL ALMRMSPLWL VRWLARFYIS 
IFRGTPLIAQ LFMIYYGLPQ FGIELDPIPA AMIGLSLNTA AYTSETLRAA ISAIDKGQWE
AAASIGMTPW QTLRRAILPQ AARVALPPLS NSFISLVKDT SLAATIQVPE LFRQAQLITS
RTLEVFTMYL AASLIYWVMA TVLSALQNYF ENQLNRQERE PK