Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2167 |
Symbol | |
ID | 6489546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2089709 |
End bp | 2090377 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642742363 |
Product | L-cystine transport system permease TcyB |
Protein accession | YP_002046003 |
Protein GI | 194450867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0765863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.00000339309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAAA GTATCCAACT GGTTATTGAA TCGCTGCCGT ATTTGCTTAA AGGCGCCGTC TTTACCCTGC AACTGAGTAT TGGCGGTATG TTTTTTGGTC TGCTGCTGGG ATTTGTGCTG GCGCTGATGC GGATGTCTCC GCTATGGCTG GTTCGCTGGC TGGCGCGCTT TTATATCTCG ATTTTTCGCG GTACGCCGCT TATCGCCCAG TTATTTATGA TCTATTACGG CCTGCCGCAA TTTGGGATTG AGCTGGACCC TATCCCGGCG GCGATGATTG GTTTATCGCT CAATACCGCG GCTTACACGT CCGAGACGCT GCGCGCGGCG ATCTCGGCTA TCGACAAGGG GCAATGGGAA GCGGCGGCGA GCATTGGCAT GACGCCGTGG CAAACGCTAC GCCGCGCTAT TTTGCCGCAG GCGGCCCGCG TCGCGCTTCC GCCGTTGAGC AACAGCTTTA TCAGCCTGGT GAAAGATACG TCGCTCGCCG CGACGATTCA GGTGCCGGAG TTGTTCCGCC AGGCGCAGTT AATTACCTCG CGAACGCTGG AGGTGTTTAC CATGTATCTG GCCGCGTCGT TAATCTACTG GGTAATGGCG ACCGTCTTAT CGGCACTGCA AAACTATTTT GAAAACCAGC TTAACCGCCA GGAGAGAGAG CCAAAATGA
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Protein sequence | MQESIQLVIE SLPYLLKGAV FTLQLSIGGM FFGLLLGFVL ALMRMSPLWL VRWLARFYIS IFRGTPLIAQ LFMIYYGLPQ FGIELDPIPA AMIGLSLNTA AYTSETLRAA ISAIDKGQWE AAASIGMTPW QTLRRAILPQ AARVALPPLS NSFISLVKDT SLAATIQVPE LFRQAQLITS RTLEVFTMYL AASLIYWVMA TVLSALQNYF ENQLNRQERE PK
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