Gene SeHA_C2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2103 
SymbolmsbB 
ID6489448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2033013 
End bp2033984 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content53% 
IMG OID642742299 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_002045942 
Protein GI194450215 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.447054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.78408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA AAAAAAATAA TAGTGAGTAT ATCCCTGAAT TCGAAAAATC CTTTCGCTAT 
CCGCAGTATT GGGGCGCCTG GTTGGGCGCT GCGGCAATGG CGGGGATCGC ATTAACACCG
GCATCATTCC GCGACCCTTT GCTGGCGACG CTGGGGCGTT TTGCCGGACG GCTGGGGAAG
AGTTCTCGTC GCCGGGCGCT AATTAATTTG TCGTTGTGCT TTCCGCAGCG TAGCGAAGCT
GAGCGCGAAG CGATTGTCGA TGAGATGTTC GCCACCGCGC CACAGGCAAT GGCGATGATG
GCTGAGTTGG CGATGCGCGG TCCGAAAAAA ATTCAACAGC GTGTTGACTG GGAAGGTCTG
GAAATCATTG AGGAGATGCG TCGTAACGAC GAAAAAGTCA TTTTTCTCGT ACCGCATGGC
TGGGGCGTCG ACATTCCAGC CATGCTGATG GCCTCTCAGG GGCAAAAAAT GGCGGCGATG
TTTCATAATC AGGGTAATCC GGTTTTTGAC TATATCTGGA ACACAGTGCG TCGGCGTTTC
GGCGGACGTT TGCATGCGCG TAATGACGGG ATTAAACCCT TTATTCAGTC TGTTCGTCAG
GGCTACTGGG GCTACTACCT GCCGGACCAG GATCACGGCC CGGAGCATAG TGAATTCGTT
GATTTCTTTG CGACATACAA AGCGACGCTG CCTGCGATTG GTCGGCTGAT GAAAGTGTGC
CGCGCACGCG TGATACCGCT TTTCCCGGTG TATAATGGTA AAACGCATCG CCTGACTATC
CAGATTCGCC CGCCAATGGA CGATCTGCTC ACGGCTGACG ACCACACTAT CGCCAGACGG
ATGAACGAAG AGGTCGAAAT TTTTGTCGGC CCGCATCCGG AACAGTACAC CTGGATCCTG
AAGCTGCTCA AAACCCGCAA GCCAGGCGAG ATTCAGCCGT ATAAGCGTAA AGATCTTTAT
CCCATCAAAT AA
 
Protein sequence
METKKNNSEY IPEFEKSFRY PQYWGAWLGA AAMAGIALTP ASFRDPLLAT LGRFAGRLGK 
SSRRRALINL SLCFPQRSEA EREAIVDEMF ATAPQAMAMM AELAMRGPKK IQQRVDWEGL
EIIEEMRRND EKVIFLVPHG WGVDIPAMLM ASQGQKMAAM FHNQGNPVFD YIWNTVRRRF
GGRLHARNDG IKPFIQSVRQ GYWGYYLPDQ DHGPEHSEFV DFFATYKATL PAIGRLMKVC
RARVIPLFPV YNGKTHRLTI QIRPPMDDLL TADDHTIARR MNEEVEIFVG PHPEQYTWIL
KLLKTRKPGE IQPYKRKDLY PIK