Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1933 |
Symbol | oppF |
ID | 6491271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1883426 |
End bp | 1884430 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642742143 |
Product | oligopeptide ABC transporter ATP-binding protein OppF |
Protein accession | YP_002045788 |
Protein GI | 194450595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.0322405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG TGATTGAACA ACGTAAAGTT CTCCTCGAAA TCGCCGATCT GAAAGTACAT TTTGATATCA AAGAAGGGAA GCAGTGGTTC TGGCAACCGC CGAAAACTTT GAAAGCGGTG GACGGCGTTA CGCTACGCCT GTATGAAGGC GAAACGCTTG GCGTGGTGGG TGAATCCGGC TGCGGCAAGT CGACGTTTGC GCGCGCCATT ATTGGTCTGG TGAAGGCGAC AGACGGTAAA GTCGCCTGGC TGGGAAAAGA TCTGTTGGGC ATGAAAGCGG ATGAGTGGCG CGAAGTGCGC AGCGATATCC AGATGATTTT CCAGGACCCG CTGGCGTCAC TCAACCCGCG AATGACGATT GGCGAAATTA TCGCGGAACC GCTGCGCACT TATCATCCTA AACTTTCGCG CCAGGACGTG CGTGACCGCG TGAAAGCCAT GATGCTGAAA GTGGGGCTGC TGCCGAATCT CATCAACCGT TATCCCCATG AATTTTCCGG GGGGCAGTGC CAGCGCATCG GTATCGCCCG GGCATTGATC CTGGAACCTA AGCTCATTAT TTGCGATGAG CCGGTGTCGG CGCTGGACGT TTCTATTCAG GCGCAGGTGG TGAATTTGCT CCAGCAGTTA CAGAGAGAGA TGGGGCTGTC GTTGATTTTT ATTGCGCACG ATCTGGCGGT CGTAAAGCAC ATATCCGATC GTGTCCTGGT GATGTATCTC GGTCATGCGG TAGAATTGGG CACCTATGAT GAGGTGTACC ATAATCCACT GCATCCTTAT ACCAAAGCGC TGATGTCGGC GGTACCGATT CCCGATCCCG ATCTGGAGCG AAATAAGCAG ATACAATTGC TGGAGGGCGA ATTACCTTCG CCCATTAACC CGCCTTCCGG CTGCGTGTTC CGTACACGCT GTCCGCTAGC CGGGCCAGAA TGCGCGCAAA CGCGACCGGT GCTGGAAGGA AGTTTTCGCC ATGCCGTTTC CTGCCTTAAA GTAGACCCGT TATAA
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Protein sequence | MNAVIEQRKV LLEIADLKVH FDIKEGKQWF WQPPKTLKAV DGVTLRLYEG ETLGVVGESG CGKSTFARAI IGLVKATDGK VAWLGKDLLG MKADEWREVR SDIQMIFQDP LASLNPRMTI GEIIAEPLRT YHPKLSRQDV RDRVKAMMLK VGLLPNLINR YPHEFSGGQC QRIGIARALI LEPKLIICDE PVSALDVSIQ AQVVNLLQQL QREMGLSLIF IAHDLAVVKH ISDRVLVMYL GHAVELGTYD EVYHNPLHPY TKALMSAVPI PDPDLERNKQ IQLLEGELPS PINPPSGCVF RTRCPLAGPE CAQTRPVLEG SFRHAVSCLK VDPL
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