Gene SeHA_C1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1890 
Symbol 
ID6491914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1846723 
End bp1847475 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content50% 
IMG OID642742102 
ProductDeoR family transcriptional regulator 
Protein accessionYP_002045747 
Protein GI194450774 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00000000000038281 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTCCC GACAACAATC AATTTTGCAA ATGGTGGTTG ATAAAGGCCA GATGAGCGTT 
GCTGAACTGG CGAAAATTAC CGGCGTATCT GAAGTCACGA TTCGTCAGGA TCTGAATACC
CTGGAAAAGC AGAGCTATTT ACGCCGTGCG CACGGTTTCG CCGTTTCGCT TGAGAGCGAT
GACGTAGAGA CTCGCATGAT GACGAACTAC ACGCTAAAAC GCCGACTGGC GGAGTTCGCC
GCCTCGCTGG TCAGTCCAGG GGAATCCGTT TTTATTGAAA ATGGCAGCAG CAATGCGCTA
TTGGCCCGGA CGCTGGCGGA ACAAAAAGAT GTCACGATCA TCACCGTGAG CAGTTATATC
GCGCACCTGC TCAAAGAGAC CCCTTGCGAA GTCATTCTCC TCGGTGGAAT CTATCAGAAA
AAAAGTGAAA GCATGGTAGG GCCGTTGACG CGACAGTTTA TCCATCAAGT GCATTTCAGC
AAAGCATTTA TCGGTATTGA TGGCTGGCAG GCTGATACCG GTTTTACCGG ACGCGACATG
ATGCGATCGG ATGTGGTTAA CGCTGTTCTG GAAAAAGGCT CAGAAGCGAT TGTCCTCACC
GACAGCTCCA AATTTGGCTG TGTGCATCCC TATCCCCTGG GCCCGCTCTC TCGCTTCCAT
CGTGTCATTA CGGATTCCAA AATTTCCGCC AGCGATCAAA TGCAGTTAGA ACATGCGGGG
CTGCTAGTCA ATGTTATTGG CTCATCCGTT TAA
 
Protein sequence
MNSRQQSILQ MVVDKGQMSV AELAKITGVS EVTIRQDLNT LEKQSYLRRA HGFAVSLESD 
DVETRMMTNY TLKRRLAEFA ASLVSPGESV FIENGSSNAL LARTLAEQKD VTIITVSSYI
AHLLKETPCE VILLGGIYQK KSESMVGPLT RQFIHQVHFS KAFIGIDGWQ ADTGFTGRDM
MRSDVVNAVL EKGSEAIVLT DSSKFGCVHP YPLGPLSRFH RVITDSKISA SDQMQLEHAG
LLVNVIGSSV