Gene SeHA_C1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1860 
Symbol 
ID6488783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1815810 
End bp1816523 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID642742073 
Productoxidoreductase 
Protein accessionYP_002045718 
Protein GI194451762 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAT TTCGCAACAA ATCTGTACTG GTTTTAGGGG GAAGTCGTGG TATCGGCGCG 
GCTATTGTAC GACGCTTTAG CGCTGACGGC GCATCGGTCG TTTTCAGCTA CGCCGGATCG
CGTGAAGCCG CCGAAAAACT GGCAACGGAA ACCGGAAGCA TCGCCATCCA GACGGATAGC
GCCGATCGTG ATGCCGTCAT CAGCCTCGTG CGTGAGTACG GACCGCTGGA TATTCTGGTC
GTCAATGCGG GCGTCGCTCT CTTCGGCGAT GCGCTGGAAC AAGATAGCGA TGCGATAGAT
CGTTTGTTCC GTATTAATAT CCATGCGCCT TACCATGCGT CAGTCGAAGC AGCCCGCAAC
ATGCCGGAAG GTGGACGCAT TATTATTATC GGTTCCGTGA ATGGCGATCG GATGCCCGTA
CCGGGAATGG CCGCGTACGC CGCCAGTAAA TCAGCCCTGC AAGGGCTGGC GCGCGGCCTG
GCCCGTGATT TTGGCCCCCG CGGGATTACG ATAAATGTGG TGCAGCCAGG CCCGATTGAT
ACCGACATCA ATCCGGAAGA TGGCCCCATG AAAGAGCTGA TGCACAGTTT CATGGCGATC
AAACGACACG GAAGACCTGA AGAAGTGGCT GGAATGGTGG CATGGCTTGC CGGTCCGGAA
GCCTCTTTCG TCACCGGCGC GATGCACACC ATCGATGGTG CCTTCGGCGC CTGA
 
Protein sequence
MTLFRNKSVL VLGGSRGIGA AIVRRFSADG ASVVFSYAGS REAAEKLATE TGSIAIQTDS 
ADRDAVISLV REYGPLDILV VNAGVALFGD ALEQDSDAID RLFRINIHAP YHASVEAARN
MPEGGRIIII GSVNGDRMPV PGMAAYAASK SALQGLARGL ARDFGPRGIT INVVQPGPID
TDINPEDGPM KELMHSFMAI KRHGRPEEVA GMVAWLAGPE ASFVTGAMHT IDGAFGA