| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1716 |
|---|
| Symbol | |
|---|
| ID | 6492187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 1668535 |
|---|
| End bp | 1669776 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642741938 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_002045583 |
|---|
| Protein GI | 194449952 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.224446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTA ATGTCTATGA GAACACCGAC AGCGAAACTA TCACCCCGCT CAACAAGCGG
CGTATTTTGC CTGTTTTCCT GCTTGTCGGC CTTTACGCCG CCAGTACAGC GGCTGTGATG
TCGGTACTGC CTTTTTATAT CCGCGAGATG GGCGGTTCGC CGCTTATCAT TGGAATCATC
ATCGCCACTG AGGCTTTTAG CCAATTTTGT GCAGCGCCCC TGATTGGCCA CCTTTCCGAT
CGCGTTGGCC GCAAGCGAAT ACTGATTGTC ACGCTGGCTA TTGCGGCGAT AAGTTTACTA
TTACTCGCCA ACGCGCAATG TATCCTGTTT ATCCTGCTCG CCCGCACGCT TTTTGGCATT
AGCGCCGGAA ATTTGTCAGC CGCCGCAGCC TATATTGCCG ATTGTACGCA CGTCAGAAAT
CGGCGTCAGG CAATCGGTAT CCTCACAGGC TGCATTGGTT TAGGCGGTAT TGTCGGGGCA
GGCGTTTCCG GGTGGCTATC GCGTATCAGT CTGGGCGCGC CGATCTACGC CGCCTTTATA
CTTGTCCTTG GGTCTGCCCT GGTCGCGATT TGGGGGTTAA AAGACCCTTC CACAACATCA
CGTACCACAG ATAAAATAGC GTCGTTCTCT GCCCGCGCTA TTTTAAAGAT GCCAGTCCTT
CGCGTCTTAA TCATCGTAAT GCTTTGTCAT TTCTTCGCCT ATGGCATGTA CTCTTCACAA
TTACCTGTTT TTCTTTCTGA CACCTTCATC TGGAATGGGC TTCCCTTTGG GCCAAAAGCG
TTAAGCTACC TGTTAATGGC GGACGGGGTT ATTAATATTT TCGTTCAGCT ATTTCTGTTA
GGTTGGGTGA GCCAATATTT TTCGGAGCGA AAGCTAATTA TCCTCATCTT CGCCCTTCTT
TGTACTGGAT TTCTCACTGC GGGTATCGCC ACGACCATAC CAGTGCTTAT TTTTGCTATC
GTTTGTATTA GCATCGCTGA TGCGCTAGCT AAACCCACTT ATCTTGCCGC CTTGTCCGTC
CATGTATCGC CTGCCCGACA AGGTATCGTC ATCGGAACGG CACAGGCATT AATCGCAATC
GCTGATTTTA TATCCCCCGT ATTGGGCGGA TTGGTCCTGG GTTATGCCCT GTATGGCGTC
TGGATCGGTA TAGCTATCTC TGTCGCCATT ATTGGTCTGG TGACGGCAAT GATTTACCTT
TCAAAAAGTT CAGTGCTAAT AGTGAAACCA GAAACAGAAT AA
|
|---|
| Protein sequence | MNTNVYENTD SETITPLNKR RILPVFLLVG LYAASTAAVM SVLPFYIREM GGSPLIIGII
IATEAFSQFC AAPLIGHLSD RVGRKRILIV TLAIAAISLL LLANAQCILF ILLARTLFGI
SAGNLSAAAA YIADCTHVRN RRQAIGILTG CIGLGGIVGA GVSGWLSRIS LGAPIYAAFI
LVLGSALVAI WGLKDPSTTS RTTDKIASFS ARAILKMPVL RVLIIVMLCH FFAYGMYSSQ
LPVFLSDTFI WNGLPFGPKA LSYLLMADGV INIFVQLFLL GWVSQYFSER KLIILIFALL
CTGFLTAGIA TTIPVLIFAI VCISIADALA KPTYLAALSV HVSPARQGIV IGTAQALIAI
ADFISPVLGG LVLGYALYGV WIGIAISVAI IGLVTAMIYL SKSSVLIVKP ETE
|
|---|
| |