Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1610 |
Symbol | sodC |
ID | 6488529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1563170 |
End bp | 1563691 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642741833 |
Product | superoxide dismutase |
Protein accession | YP_002045478 |
Protein GI | 194449684 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.815221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAT TAAGTTTAGC GATGGTGACG CTGCTGGCCT GTGCGGGTGC GCAGGCTGCC AGCGAGAAAG TAGAGATGAA TCTGGTGACG GCGCAAGGCG TAGGACAGTC TATCGGCACC GTCGTCATCG ATGAAACCGA AGGCGGCTTA AAATTTACCC CACACCTTAA AGCGTTGCCG CCGGGCGAGC ATGGTTTTCA CATTCATGCC AAAGGTAGCT GCCAGCCCGC GATTAAAGAC GGCAAAGCGG TTGCCGCAGA AGCCGCTGGT GGTCATCTGG ACCCACAAAA TACCGGTAAG CATGAAGGAC CGGAAGGTCA GGGGCATCTG GGCGACCTCC CGGTGTTAGT CGTTAATAAT GATGGTATCG CCACCGAACC GGTTACTGCG CCGCGTCTGA AGTCTCTTGA TGAAGTGAAA GATAAAGCGC TCATGATCCA TGTGGGCGGC GATAACATGT CCGATCAGCC GAAACCGCTC GGCGGCGGCG GAACGCGTTA CGCCTGCGGC GTCATTAAAT AA
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Protein sequence | MKRLSLAMVT LLACAGAQAA SEKVEMNLVT AQGVGQSIGT VVIDETEGGL KFTPHLKALP PGEHGFHIHA KGSCQPAIKD GKAVAAEAAG GHLDPQNTGK HEGPEGQGHL GDLPVLVVNN DGIATEPVTA PRLKSLDEVK DKALMIHVGG DNMSDQPKPL GGGGTRYACG VIK
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