Gene SeHA_C1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1562 
Symbol 
ID6491071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1512506 
End bp1513438 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content57% 
IMG OID642741785 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002045430 
Protein GI194451560 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000120122 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCGG AATACTCGCT TGAAGTGGTT GACGCCGTGG CGCGCAATGG CAGTTTTAGC 
GCGGCGGCGC AGGAACTGCA CCGTGTGCCT TCAGCAGTCA GTTACACCGT TCGTCAGTTA 
GAGGAGTGGC TGGCCGTACC GCTTTTTGTA CGACGTCACC GTGATGTTGA ACTGACGCCT 
GCTGGCGTCT GGTTTTTAAA AGAAGGGCGT TCTGTTATCA AAAAAATGCA GATCACTCGC 
CAGCAGTGTC AGCAAATTGC TAATGGCTGG CGCGGGCAGT TAGCTATTGC GGTGGACAAT 
ATCGTCAGAC CAGAACGTAC CCGGCAGATG ATCGTCGATT TCTATCGCCA TTTTGACGAT 
GTGGAACTGC TGGTTTTTCA GGAGGTGTTT AACGGCGTCT GGGACGCGCT CTCCGACGGG 
CGTGTCGAAC TGGCGATTGG GGCGACGCAG GCGATTCCGG TAGGGGGGCG TTACGCTTTT 
CGGGATATGG GGACCCTGAG CTGGAGCTGC GTAGTGGCAA GCGATCACCC GCTGGCGTCG 
ATGCCTGGGC CGTTAAGCGA TGATACCCTG CGCAACTGGC CGTCGCTGGT CAGGGAAGAC 
ACTTCGCGAA CCTTACCGAA ACGGATTACC TGGCTGCTGG ATAACCAAAA AAGGGTCGTC 
GTACCGGACT GGGAGTCATC GGCAACCTGC CTGTCGGCAG GACTATGCGT GGGAATGGTG 
CCGACGCATT TTGCCCGACA GTGGATAGAC AGCGGAAAAT GGGTGGCGCT GACGTTAGAG 
AATCCGTTTC CCGATGCGGC CTGTTGCGTG ACGTGGCAGC AAAACGAGGC CTCGCCCGCG 
CTGACATGGC TGCTGGACTA TTTGGGCGAT AGCGAAACGT TGAATCGGGA GTGGCTGCGG 
GAGCCAGAAG AGGCTCCCGA CAGCGGGGAT TAA
 
Protein sequence
MWSEYSLEVV DAVARNGSFS AAAQELHRVP SAVSYTVRQL EEWLAVPLFV RRHRDVELTP 
AGVWFLKEGR SVIKKMQITR QQCQQIANGW RGQLAIAVDN IVRPERTRQM IVDFYRHFDD 
VELLVFQEVF NGVWDALSDG RVELAIGATQ AIPVGGRYAF RDMGTLSWSC VVASDHPLAS 
MPGPLSDDTL RNWPSLVRED TSRTLPKRIT WLLDNQKRVV VPDWESSATC LSAGLCVGMV 
PTHFARQWID SGKWVALTLE NPFPDAACCV TWQQNEASPA LTWLLDYLGD SETLNREWLR 
EPEEAPDSGD