Gene SeHA_C1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1500 
Symbol 
ID6488130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1455734 
End bp1457080 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content48% 
IMG OID642741726 
Productdicarboxylate/amino acid:cation (Na+ or H+) symporter family protein 
Protein accessionYP_002045373 
Protein GI194449338 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0000799891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGTTA CGCTCGCGTA TATCGCACTT TTTTTGGTTT TCTCGTGGGT CATCTTGAGA 
ATTAATCAAA AAAGCGATTC CCTGTCGAAA AGCGTTTTTA TCGCTATCTT TTTAGGGGCT
GTTATTGGTT TATCCCTGCA TTTTATTTCA GCAAATCACA CTAAAACTAT TATCGAATGG
TACAGCATCG TCGGCAATGG TTACGTCCAC CTGCTAAAAC TGGTCGCTAT ACCGCTAATT
TTTATTTCTA TTCTTTCCGC CATCAATAAA CTGGAAAATA GCGCCGGCAT CGGAAAAATG
TCGCTGACGA TCGTCGGATG CATGTTATGT CTGGTGATGG TTGCCGGTTT TATCGGATTA
CTGACCGCTC ATATACTGGG GCTTGACGCC AGCGCTTTTG TGCACATGCC GTCAATGTTA
ACTACAGAAG AAGTCAATAA GACTGCCGCG GTGTCGATTC CCCAGTTAGT GACATCGCTG
ATTCCGACTA ATATTTTTCT TGATCTTACG GGGGCCAGAA GTGTTTCCGT TATCGGCATC
GTTATCTTCA CGCTAATAGC GGGGATCGCC CTGTTAAAGG TCAAAAAAGA GGCGCCGGAA
GAAGGTCAGA AATTAAGCGC AGGCATTAAC GCTATTCAGA TCTGGGTCAT GAAGATGGTA
CGTATCGTTA TTGCATTAAC GCCCTATGGC GTCATGGCAT TAATGACTAC CGTATTTTCA
TCATACCGCC TTGAACAATT CGCCAGCTTA CTTGGTTTTA TCGGTGCCTG TTACATCGCG
ATTTTTATGA TGTTTATCGT GCATGCCATC TTGCTGATCC TCAGCGGTAA TAATCCAGCG
CGTTATTTCA GAATGGTCTG GCCCGTCTTA ACCTTTGCGT TTGTTTCCCG CAGCAGCGCA
GCCTCTATCC CGCTGGCCAT TTCCGCCCAG GAAAAATTTG GCGTACAAAG CACCATTGCC
AATATTTCCG CCTCGTTTGG CTCCAGTATG GGGCAAAATG GCTGCGCCGG GATTTATCCG
GCTATTATGG TAGCGATGAT TGCGCCCACC ATCGGCATCG ATCCGCTCTC GCTGCATTTT
CTGGCCGCGA TGTTGCCTGC CATTGCGCTA GGGTCTATTG GCGTAGCCGG CGTCGGCGGC
GGTGGTACGT TCGCGGCGCT GATTGTCCTG TCGACGTTGA ATTTTCCCGT TGCGCTGGTC
GGTATTTTTA TTGCCATCGA ACCTATCGTT GATATGGCCC GCACGGCACT GAACGTTAAC
GGATCGATGA TGTCAGGTGT GCTGGCTAAC CGTATTTTGA ATAATCATAC GGCTGACGAC
ATGCCGGCGG TTATTGACAG ACCTTAG
 
Protein sequence
MVVTLAYIAL FLVFSWVILR INQKSDSLSK SVFIAIFLGA VIGLSLHFIS ANHTKTIIEW 
YSIVGNGYVH LLKLVAIPLI FISILSAINK LENSAGIGKM SLTIVGCMLC LVMVAGFIGL
LTAHILGLDA SAFVHMPSML TTEEVNKTAA VSIPQLVTSL IPTNIFLDLT GARSVSVIGI
VIFTLIAGIA LLKVKKEAPE EGQKLSAGIN AIQIWVMKMV RIVIALTPYG VMALMTTVFS
SYRLEQFASL LGFIGACYIA IFMMFIVHAI LLILSGNNPA RYFRMVWPVL TFAFVSRSSA
ASIPLAISAQ EKFGVQSTIA NISASFGSSM GQNGCAGIYP AIMVAMIAPT IGIDPLSLHF
LAAMLPAIAL GSIGVAGVGG GGTFAALIVL STLNFPVALV GIFIAIEPIV DMARTALNVN
GSMMSGVLAN RILNNHTADD MPAVIDRP