Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1430 |
Symbol | astC |
ID | 6488794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1387239 |
End bp | 1388465 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642741662 |
Product | bifunctional succinylornithine transaminase/acetylornithine transaminase |
Protein accession | YP_002045309 |
Protein GI | 194449481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.153186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTGT CAGTTACGCG CGAAAACTTT GATGAATGGA TGGTGCCGGT ATACGTTCCC GCGCCTTTTA TTCCTGTACG CGGAGAAGGC TCACGCCTGT GGGATCAGCA GGGGAAAGAG TATATTGATT TTGCTGGCGG GATCGCGGTC AACGCCTTGG GACATGCGCA TCCGGCGCTG CGCGAGGCGT TAAATGAACA GGCGAATCGC TTCTGGCATA CCGGGAACGG TTACACCAAT GAACCGGCGC TGCGACTGGC GAAAAAACTG ATCGACGCGA CCTTCGCCGA ACGCGTTTTC TTTTGTAATT CAGGCGCTGA AGCAAATGAA GCAGCATTAA AACTGGCGCG CAAATATGCC CACGATCGTG TCGGCAATCA TAAAAGCGGC ATTGTGGCCT TTAAAAACGC GTTCCATGGC CGCACGCTCT TTACCGTCAG CGCTGGCGGT CAACCCACCT ATTCACAGGA CTTTGCGCCG CTGCCGCCGG ATATTCGTCA TGCAGCCTAT AACGATCTGA ACTCCGCCAG CGCGCTAATT GATGACAATA CCTGCGCCGT GATCGTAGAA CCTGTGCAGG GCGAGGGCGG CGTGATCCCC GCCACGAAAG CTTTTTTGCA GGGGCTGCGT GAATTGTGCG ACCGGCATCA GGCGTTACTG ATTTTTGATG AGGTGCAGAC GGGCGTCGGA CGTACCGGCG AACTGTATGC ATATATGCAT TATGGCGTTA CGCCCGATAT CCTGACGACT GCTAAAGCGT TGGGTGGGGG CTTCCCGATC GGCGCGATGC TGACTACGCA AGACTATGCC AGCGTTATGA CGCCAGGCAC GCATGGCACC ACCTACGGCG GTAATCCGCT GGCGACGGCA GTTGCCGGAA AAGTACTGGA TATCATCAAT ACGCCGGAGA TGCAAAACGG CGTCAGACAG CGCCACGATG CGTTTATTGA GCGCCTAAAT ACCATTAATG TACGTTTTGG CATGTTCAGT GAAATTCGCG GTCTGGGGCT ACTGCTTGGC TGTGTGCTAC AGACGGAGTT TGCCGGAAAA GCCAAACTCA TCGCCCAGGA AGCGGCAAAA GCAGGTGTGA TGGTGCTCAT CGCTGGCGGC GACGTGGTGC GTTTTGCGCC AGCGTTAAAT GTGAGCGACG AGGAGATAGC CACCGGGCTT GATCGTTTTG CCCTGGCGTG CGAACGCCTT CAGACGGGAG GCGCATCATG CGGGTGA
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Protein sequence | MSLSVTRENF DEWMVPVYVP APFIPVRGEG SRLWDQQGKE YIDFAGGIAV NALGHAHPAL REALNEQANR FWHTGNGYTN EPALRLAKKL IDATFAERVF FCNSGAEANE AALKLARKYA HDRVGNHKSG IVAFKNAFHG RTLFTVSAGG QPTYSQDFAP LPPDIRHAAY NDLNSASALI DDNTCAVIVE PVQGEGGVIP ATKAFLQGLR ELCDRHQALL IFDEVQTGVG RTGELYAYMH YGVTPDILTT AKALGGGFPI GAMLTTQDYA SVMTPGTHGT TYGGNPLATA VAGKVLDIIN TPEMQNGVRQ RHDAFIERLN TINVRFGMFS EIRGLGLLLG CVLQTEFAGK AKLIAQEAAK AGVMVLIAGG DVVRFAPALN VSDEEIATGL DRFALACERL QTGGASCG
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