Gene SeHA_C1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1348 
Symbol 
ID6487933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1323029 
End bp1323703 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID642741583 
ProductDNA-binding transcriptional regulator PhoP 
Protein accessionYP_002045233 
Protein GI194448565 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.898819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG TACTGGTTGT AGAGGATAAT GCATTATTAC GCCACCACCT GAAGGTTCAG 
CTCCAGGATT CAGGTCACCA GGTCGATGCC GCAGAAGATG CCAGGGAAGC TGATTACTAC
CTTAATGAAC ACCTTCCGGA TATCGCTATT GTCGATTTAG GTCTGCCGGA TGAAGACGGC
CTTTCCTTAA TACGCCGCTG GCGCAGCAGT GATGTTTCAC TGCCGGTTCT GGTGTTAACC
GCGCGCGAAG GCTGGCAGGA TAAAGTCGAG GTTCTCAGCT CCGGGGCCGA TGACTACGTG
ACGAAGCCAT TCCACATCGA AGAGGTAATG GCGCGTATGC AGGCGTTAAT GCGCCGTAAT
AGCGGTCTGG CCTCCCAGGT GATCAACATC CCGCCGTTCC AGGTGGATCT CTCACGCCGG
GAATTATCCG TCAATGAAGA GGTCATCAAA CTCACGGCGT TCGAATACAC CATTATGGAA
ACGCTTATCC GTAACAACGG TAAAGTGGTC AGCAAAGATT CGCTGATGCT TCAGCTGTAT
CCGGATGCGG AACTGCGGGA AAGTCATACC ATTGATGTTC TCATGGGGCG TCTGCGGAAA
AAAATACAGG CCCAGTATCC GCACGATGTC ATTACCACCG TACGCGGACA AGGATATCTT
TTTGAATTGC GCTAA
 
Protein sequence
MMRVLVVEDN ALLRHHLKVQ LQDSGHQVDA AEDAREADYY LNEHLPDIAI VDLGLPDEDG 
LSLIRRWRSS DVSLPVLVLT AREGWQDKVE VLSSGADDYV TKPFHIEEVM ARMQALMRRN
SGLASQVINI PPFQVDLSRR ELSVNEEVIK LTAFEYTIME TLIRNNGKVV SKDSLMLQLY
PDAELRESHT IDVLMGRLRK KIQAQYPHDV ITTVRGQGYL FELR