Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1233 |
Symbol | putA |
ID | 6491278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1212325 |
End bp | 1216287 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642741472 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_002045123 |
Protein GI | 194450558 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.644344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCA CCACGATGGG GGTTAAGCTG GACGACGCCA CGCGCGAACG GATCAAAATG GCCGCGTCGC GTATCGATCG CACGCCGCAC TGGTTAATAA AACAGGCAAT CTTTAGCTAT CTGGACAAGC TGGAAAATAG CGATACGCTA CCGGAGCTAC CTGCGCTGTT TGCTGGCGCG GCAAATGAAA GCGAGGAGCC GGTCGCGCCG CAGGATGAGT CGCATCAGCC CTTTCTGGAG TTTGCCGAAC AGATTCTTCC CCAATCCGTC TCTCGCGCCG CCATCACCGC CGCCTGGCGC CGCCCGGAAA CCGATGCGGT GTCAATGCTA ATGGAACAGG CGCGCCTGTC GCCGCCTGTC GCTGAGCAGG CGCATAAACT GGCGTATCAA CTGGCGGAGA AATTGCGCAA TCAAAAATCC GCCAGCGGTC GCGCGGGTAT GGTGCAAGGC CTGTTGCAGG AGTTTTCCCT CTCTTCGCAA GAAGGCGTAG CGCTGATGTG TCTGGCGGAA GCGCTGCTGC GTATTCCCGA CAAAGCTACG CGCGATGCGT TAATTCGCGA CAAAATCAGT AATGGCAACT GGCAGTCGCA TATTGGCCGT AGCCCGTCGC TGTTTGTAAA TGCCGCCACA TGGGGGCTGC TCTTTACCGG CCGGCTGGTC TCAACGCATA ACGAAGCCAA TCTTTCGCGC TCGCTGAACC GCATTATCGG CAAGAGCGGC GAGCCGTTAA TCCGCAAAGG CGTCGACATG GCGATGCGTT TAATGGGCGA GCAGTTCGTG ACTGGCGAAA CCATTGCTCA GGCGCTGGCG AATGCCCGAA AACTGGAAGA GAAAGGGTTC CGCTATTCTT ACGATATGCT GGGCGAAGCC GCGTTAACCG CCGCCGATGC GCAGGCCTAT ATGGTCTCTT ACCAGCAAGC GATTCATGCC ATCGGCAAAG CGTCTAACGG TCGCGGTATT TACGAAGGGC CAGGCATCTC AATTAAGCTG TCCGCCCTGC ATCCACGCTA TAGTCGCGCG CAATACGATC GGGTAATGGA GGAGCTTTAT CCGCGCCTGA AATCCCTGAC GCTGCTGGCG CGCCAGTACG ACATTGGTCT CAATATCGAC GCCGAAGAGG CGGATCGTCT GGAGATCTCG CTCGATCTGC TGGAAAAACT CTGCTTCGAA CCCGAACTCG CAGGCTGGAA CGGCATTGGC TTTGTGATCC AGGCTTACCA AAAACGCTGT CCACTGGTCA TTGATTATTT AGTCGATCTG GCCTCCCGTA GCCGCCGTCG GCTGATGATT CGTCTGGTGA AAGGCGCCTA CTGGGATAGC GAAATCAAAC GCGCGCAAAT GGAAGGGCTG GAGGGCTATC CGGTTTATAC CCGCAAAGTG TATACCGATG TCTCTTATCT GGCCTGCGCG AAAAAACTGC TCGCCGTTCC TAATCTGATC TACCCGCAGT TCGCGACCCA TAACGCTCAC ACACTGGCGG CGATTTATCA TCTGGCCGGG CAAAATTACT ATCCGGGTCA GTACGAATTC CAGTGCCTGC ACGGCATGGG CGAACCGCTG TATGAACAGG TCACCGGTAA AGTAGCGGAC GGAAAACTTA ACCGTCCCTG CCGTATTTAC GCGCCGGTGG GAACACACGA AACCCTGCTG GCCTATCTGG TACGACGCCT GCTGGAAAAC GGCGCCAACA CCTCTTTTGT CAACCGCATC GCCGATGCCA CCCTACCGCT CGATGAACTG GTGGCCGACC CGGTCGAGGC CGTGGAAAAA CTGGCGCAGC AGGAAGGTCA GGCTGGCATA CCGCATCCGA AAATTCCGCT GCCGCGCGAT CTGTACGGCG AAGGTCGGAT AAACTCCGCC GGACTTGATT TAGCGAATGA ACATCGCCTC GCCTCGCTTT CTTCTGCCCT GTTAAGCAAC GCCATGCAGA AATGGCAGGC CAAACCTGTG CTGGAACAAC CGGTGGCCGA CGGTGAGATG ACGCCGGTTA TCAACCCGGC GGAACCGAAA GATATTGTCG GCTGGGGACG CGAAGCGACA GAAAGCGAGG TTGAACAGGC ATTGCAAAAC GCGGTCAATC AGGCGCCGGT TTGGTTTGCG ACGCCGCCGC AAGAACGCGC CGCCATTTTG CAGCGGGCGG CGGTATTGAT GGAAGACCAA ATGCAGCAGT TGATTGGCCT GTTGGTGCGC GAAGCGGGGA AAACGTTCAG CAACGCCATT GCCGAAGTGC GCGAAGCGGT AGACTTCCTC CATTATTATG CCGGCCAAGT GCGTGACGAT TTCGATAACG AAACGCATCG CCCGTTAGGG CCGGTGGTCT GCATCAGTCC GTGGAACTTC CCGCTGGCCA TTTTCACCGG CCAAATCGCC GCCGCGCTGG CGGCAGGTAA CAGCGTTCTG GCGAAACCGG CAGAGCAGAC ATCGCTGATT GCCGCCCAGG GCATTGCCAT TTTGCTGGAA GCGGGCGTAC CGCCGGGCGT CGTGCAACTG TTGCCGGGAC GGGGAGAAAC CGTCGGCGCC CAGCTTACCG CCGATGCGCG TGTACGCGGC GTGATGTTTA CCGGCTCCAC GGAGGTCGCG ACGTTGTTGC AGCGCAACAT CGCCACGCGT CTTGACGCCC AGGGCCGCCC TATTCCGTTG ATTGCGGAAA CCGGCGGTAT GAACGCTATG ATTGTCGACT CTTCCGCGCT CACCGAGCAG GTGGTCGTGG ATGTGCTGGC TTCCGCTTTC GACAGCGCCG GACAACGCTG TTCCGCGCTC CGCGTGCTGT GTTTGCAGGA CGATATCGCC GAACATACGC TGAAAATGTT ACGCGGCGCG ATGGCGGAGT GTCGGATGGG GAATCCAGGC CGTCTGACGA CCGATATCGG GCCGGTGATC GATAGCGAGG CCAAAGCCAA CATTGAACGT CATATCCAGA CAATGCGCGC CAAAGGCCGC CCGGTTTTCC AGGCCGCACG TGAAAACAGC GATGATGCGC AGGAATGGCA GACCGGTACG TTTGTTATGC CCACGCTTAT TGAGCTGGAA AACTTCGCAG AACTGGAAAA AGAGGTCTTC GGACCCGTGC TGCACGTCGT GCGTTATAAC CGTAACCAAC TGGCGGAGCT TATCGAACAG ATTAACGCTT CCGGCTACGG GCTAACGCTG GGCGTACATA CCCGTATTGA TGAAACCATT GCGCAAGTCA CCGGTTCCGC CCATGTCGGC AACCTGTACG TTAACCGTAA TATGGTGGGC GCGGTCGTCG GCGTCCAGCC GTTTGGCGGC GAAGGACTGT CCGGCACCGG GCCAAAAGCG GGAGGGCCGC TCTATCTCTA CCGCCTGCTG GCACACCGCC CGCCCAATGC GCTCAATACG ACGCTGACTC GTCAGGATGC GCGTTACCCG GTGGATGCGC AGCTTAAAAC CACGCTACTC GCGCCGTTGA CCGCTCTGAC GCAATGGGCG GCGGATCGCC CGGCGCTACA GACGCTCTGC CGACAATTCG CCGATCTGGC GCAGGCCGGC ACGCAGCGCC TGCTACCGGG ACCGACCGGC GAGCGCAATA CCTGGACGCT GTTGCCGCGT GAACGGGTAT TATGCCTGGC TGATGACGAA CAGGACGCGT TGACGCAGCT TGCCGCCGTT CTCGCCGTCG GCAGTCAGGC GCTATGGTCA GACGACGCCT TCCACCGCGA TCTGGCGAAA CGTCTCCCCG CCGCCGTTGC GGCGCGTGTC CAGTTTGCGA AAGCGGAAAC GCTGATGGCG CAGCCGTTTG ACGCAGTGAT TTTCCACGGC GACTCCGACA AGCTGCGAAC CGTGTGCGAA GCCGTCGCCG CCCGCGAAGG CGCGATAGTG TCGGTACAGG GGTTCGCCCG CGGCGAAAGC AATATGCTGC TGGAACGGCT CTATATTGAA CGTTCGCTGA GCGTAAACAC TGCCGCCGCT GGCGGTAATG CCAGCCTGAT GACAATTGGC TAA
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Protein sequence | MGTTTMGVKL DDATRERIKM AASRIDRTPH WLIKQAIFSY LDKLENSDTL PELPALFAGA ANESEEPVAP QDESHQPFLE FAEQILPQSV SRAAITAAWR RPETDAVSML MEQARLSPPV AEQAHKLAYQ LAEKLRNQKS ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGRLV STHNEANLSR SLNRIIGKSG EPLIRKGVDM AMRLMGEQFV TGETIAQALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA RQYDIGLNID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLVDL ASRSRRRLMI RLVKGAYWDS EIKRAQMEGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI YPQFATHNAH TLAAIYHLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY APVGTHETLL AYLVRRLLEN GANTSFVNRI ADATLPLDEL VADPVEAVEK LAQQEGQAGI PHPKIPLPRD LYGEGRINSA GLDLANEHRL ASLSSALLSN AMQKWQAKPV LEQPVADGEM TPVINPAEPK DIVGWGREAT ESEVEQALQN AVNQAPVWFA TPPQERAAIL QRAAVLMEDQ MQQLIGLLVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FDNETHRPLG PVVCISPWNF PLAIFTGQIA AALAAGNSVL AKPAEQTSLI AAQGIAILLE AGVPPGVVQL LPGRGETVGA QLTADARVRG VMFTGSTEVA TLLQRNIATR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ VVVDVLASAF DSAGQRCSAL RVLCLQDDIA EHTLKMLRGA MAECRMGNPG RLTTDIGPVI DSEAKANIER HIQTMRAKGR PVFQAARENS DDAQEWQTGT FVMPTLIELE NFAELEKEVF GPVLHVVRYN RNQLAELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL AHRPPNALNT TLTRQDARYP VDAQLKTTLL APLTALTQWA ADRPALQTLC RQFADLAQAG TQRLLPGPTG ERNTWTLLPR ERVLCLADDE QDALTQLAAV LAVGSQALWS DDAFHRDLAK RLPAAVAARV QFAKAETLMA QPFDAVIFHG DSDKLRTVCE AVAAREGAIV SVQGFARGES NMLLERLYIE RSLSVNTAAA GGNASLMTIG
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