Gene SeHA_C1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1216 
SymbolhpaI 
ID6491446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1197900 
End bp1198691 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID642741455 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_002045106 
Protein GI194448754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0790089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG CTTTCAAAGA CGCGTTAAAA GCGGGGCGCC CGCAAATCGG TTTGTGGCTG 
GGGCTTGCCA ACAGTTACAG CGCTGAACTG TTAGCGGGCG CCGGCTTCGA CTGGCTACTG
ATTGACGGTG AACACGCGCC AAACAACGTG CAGACGGTGT TGACCCAGTT GCAGGCGATT
GCGCCCTATC CCAGCCAGCC GGTGGTGCGT CCGTCGTGGA ACGATCCGGT ACAGATTAAG
CAATTGCTCG ACGTCGGCGC GCAAACGCTG CTGATACCGA TGGTGCAGAA TGCCGATGAA
GCGCGAAACG CCGTAGCGGC TACGCGTTAT CCGCCTGCCG GTATTCGCGG CGTGGGCAGC
GCGCTGGCGC GGGCATCGCG CTGGAATCGC ATTCCGAACT ATCTCCACCA GGCCAACGAC
GCCATGTGCG TACTGGTGCA GATTGAAACG CGTGAGGCGA TGAGCAATCT GGCGTCAATT
CTCGACGTGG ATGGCATTGA CGGCGTGTTT ATTGGTCCGG CGGACCTCAG CGCCGATATG
GGCTTTGCCG GCAATCCGCA GCACCCGGAA GTGCAGGCGG CGATTGAGAA CGCCATCGTG
CAGATACGCG CGGCGGGGAA AGCGCCGGGG ATTCTGATGG CCAATGAAGC ACTGGCGAAA
CGTTATCTGG AACTGGGGGC GCTATTTGTC GCCGTCGGCG TTGACACCAC GCTGCTGGCG
CGCGGCGCGG AGGCGCTGGC GGCGCGCTTT GGCGCAGAAA AAAAGCTGTC CGGTGCGTCC
GGCGTCTATT AA
 
Protein sequence
MKNAFKDALK AGRPQIGLWL GLANSYSAEL LAGAGFDWLL IDGEHAPNNV QTVLTQLQAI 
APYPSQPVVR PSWNDPVQIK QLLDVGAQTL LIPMVQNADE ARNAVAATRY PPAGIRGVGS
ALARASRWNR IPNYLHQAND AMCVLVQIET REAMSNLASI LDVDGIDGVF IGPADLSADM
GFAGNPQHPE VQAAIENAIV QIRAAGKAPG ILMANEALAK RYLELGALFV AVGVDTTLLA
RGAEALAARF GAEKKLSGAS GVY