Gene SeHA_C1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1052 
Symbol 
ID6490357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1033709 
End bp1034620 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content58% 
IMG OID642741294 
ProductLysR family transcriptional regulator 
Protein accessionYP_002044946 
Protein GI194450844 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA CGGATCTCAA TGATTTTGCG TGGTTTGTGC ATGTGGTCGA AGAGGGTGGG 
TTTGCCGCGG CGGGGCGTGC GCTTGATGAA CCAAAATCAA AACTGAGCCG GCGTATTGCG 
CAACTGGAGG AACGGCTGGG CGTGCGATTG ATTCAGCGAA CCACCCGGCA GTTTAACGTT 
ACCGAAGTGG GGCAAACATT CTATGAGCAC TGTAAAGCGA TGCTGGTGGA AGCTCAGGCG 
GCGCAGGATG CCATTGCCGC ATTGCAGGTA GAGCCTCGCG GTATCGTGAA GCTGACCTGC 
CCGGTGACGC TGCTGCATGT ACACATCGGC CCAATGCTGG CGAAATTTAT GGCGCGTTAT 
CCTGATGTTT CGCTACAGCT TGAAGCAACC AATCGTCGGG TGGACGTCGT AGGGGAGGGG 
GTGGATGTGG CGATTCGCGT CAGGCCGCGC CCGTTTGAGG ATAGCGACCT GGTGATGCGC 
GTCCTGGCTG ACAGAGGGCA TCGCTTGTTT GCCAGCCCGG ATCTTATCGC ACGGATGGGA 
ATCCCTTCCG CGCCGGCGGA GTTGAGCCAT TGGCCTGGGC TAAGTCTTGC ATCCGGCAAG 
CATATCCACC GCTGGGAACT TTACGGCCCG CAGGGCGCGC GTGCGGAAGT CCATTTTACC 
CCGCGTATGA TTACCACCGA CATGTTGGCG CTACGCGAGG CGGCGATGGC GGGCGTGGGG 
CTTGTGCAGC TACCTGTCTT AATGGTGAAA GAACAACTGG CCGCCGGTGA ACTGGTCGCG 
GTGCTGGAAG AGTGGGAGCC CCGGCGGGAG GTTATTCATG CTGTGTTCCC ATCCCGGCGA 
GGATTATTAC CTTCCGTACG TGCGTTGGTC GATTTTTTGA CGGAAGAGTA TGCGCGAATG 
GTGGAAGAGT AA
 
Protein sequence
MIKTDLNDFA WFVHVVEEGG FAAAGRALDE PKSKLSRRIA QLEERLGVRL IQRTTRQFNV 
TEVGQTFYEH CKAMLVEAQA AQDAIAALQV EPRGIVKLTC PVTLLHVHIG PMLAKFMARY 
PDVSLQLEAT NRRVDVVGEG VDVAIRVRPR PFEDSDLVMR VLADRGHRLF ASPDLIARMG 
IPSAPAELSH WPGLSLASGK HIHRWELYGP QGARAEVHFT PRMITTDMLA LREAAMAGVG 
LVQLPVLMVK EQLAAGELVA VLEEWEPRRE VIHAVFPSRR GLLPSVRALV DFLTEEYARM 
VEE