Gene SeHA_C1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1012 
SymbolpotG 
ID6490082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp996852 
End bp997985 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content54% 
IMG OID642741255 
Productputrescine transporter ATP-binding subunit 
Protein accessionYP_002044908 
Protein GI194447705 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.471128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones110 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGATG TCCCCCACCG CCCGCAGGTG AAAACCCGTA AAGCGCTGAC GCCGCTTCTG 
GAAATTCGCA ACCTGACGAA GTCATTCGAC GGGCAACATG CTGTCGATGA TGTCAGTCTG
ACTATCTATA AAGGCGAGAT TTTTGCCCTG CTGGGCGCGT CAGGTTGTGG AAAATCGACT
CTGCTACGGA TGCTGGCAGG TTTTGAACCG CCGAGCAGCG GGCAAATTAT GCTCGACGGC
GTCGATCTGG CGCATGTTCC GCCGTATCAG CGTCCGATTA ATATGATGTT TCAGTCCTAT
GCGTTGTTTC CGCATATGAC GGTAGAGCAG AACATCGCTT TTGGTCTGAA GCAGGACAAA
CTGCCGAAGG TGGAGATTAC CAGCCGCGTC AATGAGATGC TGGGTCTGGT GCACATGCAG
GAGTTTGCGA AACGTAAGCC GCATCAGCTT TCCGGCGGTC AGCGTCAGCG CGTGGCCCTG
GCGCGCAGCC TGGCGAAACG TCCTAAGCTG CTCTTGTTGG ATGAACCGAT GGGCGCGCTG
GATAAAAAAT TACGCGACCG GATGCAGCTT GAAGTGGTGG ATATCCTTGA GCGCGTCGGC
GTGACCTGCG TCATGGTGAC GCACGATCAG GAAGAAGCGA TGACGATGGC GGGGCGCATT
GCCATCATGA ACCGTGGAAA ATTTGTGCAA ATTGGCGAAC CGGAGGAGAT TTACGAGCAT
CCGACGACCC GCTACAGCGC CGAATTTATC GGATCGGTAA ATGTTTTTGA GGGCTTACTG
AAAGCGCGTG AAGAGGATGG TCTGGTCATT GACGCGCCCG GTTTGGTTCA TCCGTTAAAA
GTCGATGCAG ATGCCTCTGT CGTTGATAAT GTGCCGGTAT ATGTGGCGCT ACGTCCGGAA
AAAATCATGC TCTGTGAGTC GCCGCCTGCC GATGGCTATA ATTTCGCCGT CGGTGAAGTG
GCGCATATTG CGTATCTCGG CGATCTGTCT ATTTATCATG TGCGGCTAAA AAGCGGGCAG
ATGATCAGCG CTCAACTGCA GAATGCGCAC CGTTACCGGA AAGGGTTACC GACCTGGGGC
GATGAAGTGC GTTTGTGCTG GGAAGCGGAT AGCTGCGTGG TCCTGACGGT ATAA
 
Protein sequence
MNDVPHRPQV KTRKALTPLL EIRNLTKSFD GQHAVDDVSL TIYKGEIFAL LGASGCGKST 
LLRMLAGFEP PSSGQIMLDG VDLAHVPPYQ RPINMMFQSY ALFPHMTVEQ NIAFGLKQDK
LPKVEITSRV NEMLGLVHMQ EFAKRKPHQL SGGQRQRVAL ARSLAKRPKL LLLDEPMGAL
DKKLRDRMQL EVVDILERVG VTCVMVTHDQ EEAMTMAGRI AIMNRGKFVQ IGEPEEIYEH
PTTRYSAEFI GSVNVFEGLL KAREEDGLVI DAPGLVHPLK VDADASVVDN VPVYVALRPE
KIMLCESPPA DGYNFAVGEV AHIAYLGDLS IYHVRLKSGQ MISAQLQNAH RYRKGLPTWG
DEVRLCWEAD SCVVLTV