Gene SeHA_C0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0942 
Symbol 
ID6491858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp929051 
End bp930157 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content53% 
IMG OID642741190 
ProductABC-2 type transporter, permease 
Protein accessionYP_002044843 
Protein GI194449363 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0820172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCATC GTTTATGGAC GTTAATTCGC AAAGAACTGC AATCGCTTTT ACGCGAACCG 
CAAACGCGCG CGATCCTTAT TCTGCCGGTG CTGATTCAGG TCATCCTGTT TCCGTTCGCC
GCGACGCTTG AAGTCACTAA CGCGACTATC GCCATCTATA ACGAAGATAA CGGCAAACAT
TCGGTAGAAC TTACCCAGCG CTTTGCCCGC GCGAAAGCGT TTACCCATGT GCTATTGCTG
AACAGTCCGC AGGAGATCCA GCCGACTATC GATACGCAAA AAGCGCTGCT GCTGGTACGC
TTCCCGGCGG ATTTCTCGCG GAATCTGGAT ACCTTCCAGC CTGCGCCGAT GCAACTCATT
CTTGATGGAC GTAACTCCAA CAGCGCGCAA ATCGCCGCCA ATTATCTGCA ACAGATCGTC
AAGGAGTATC AGCAGACATT GATGGACGGC AAGCCAAAGC CCAACAATAG CGAACTGGTG
GTACGCAACT GGTATAACCC GAATCTGGAC TACAAGTGGT TTGTAGTGCC CTCGCTGATC
GCCATGATCA CCACTATTGG CGTGATGATC GTCACTTCGC TGTCCGTCGC CCGCGAGCGT
GAACAAGGCA CTCTGGATCA GCTGCTGGTC TCTCCGCTCA CCACCTGGCA GATTTTCGTT
GGTAAAGCGG TGCCGGCGCT GATTGTCGCG ACCTTCCAGG CCACGATCGT GCTGGCTATC
GGCATTTGGG CATACCAAAT TCCCTTCGCC GGTTCGTTAG CGCTGTTTTA TTTCACGATG
GTGATTTACG GGCTGTCGCT GGTAGGCTTT GGCTTGCTGA TATCATCGCT TTGCGCCACG
CAACAGCAGG CGTTTATCGG CGTCTTTGTC TTTATGATGC CGGCGATTTT GCTCTCGGGT
TATGTCTCGC CGGTGGAAAA TATGCCGGTC TGGCTGCAAA ACCTGACGTG GATAAACCCT
ATCCGCCACT TTACTGATAT TACTAAGCAA ATTTATCTTA AGGATGCGAG TCTGGGAATT
GTCTGGGGAA GTTTGTGGCC GCTACTGGTG ATAGCGGCCA CCACGGGGTC AGCGGCGTAT
GCGATGTTTA GACGCAAAGT GATGTAG
 
Protein sequence
MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYNEDNGKH 
SVELTQRFAR AKAFTHVLLL NSPQEIQPTI DTQKALLLVR FPADFSRNLD TFQPAPMQLI
LDGRNSNSAQ IAANYLQQIV KEYQQTLMDG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI
AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFV GKAVPALIVA TFQATIVLAI
GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCAT QQQAFIGVFV FMMPAILLSG
YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLGI VWGSLWPLLV IAATTGSAAY
AMFRRKVM