| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0821 |
|---|
| Symbol | potE |
|---|
| ID | 6491191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 810484 |
|---|
| End bp | 811803 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642741073 |
|---|
| Product | putrescine transporter |
|---|
| Protein accession | YP_002044731 |
|---|
| Protein GI | 194449007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.438039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 0.147845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC CTAAATCCAA TAAAATGGGT GTCGTGCAGC TCACAATTCT GACTATGGTC
AACATGATGG GCTCCGGGAT CATCATGCTA CCGACCAAAC TGTCTGAAGT CGGCACGATA
TCCATTATCT CCTGGCTGGT CACCGCCGTC GGCTCGATGG CACTGGCCTG GGCGTTTGCG
AAATGCGGTA TGTTTAGCCG TAAATCCGGC GGCATGGGCG GTTACGCCGA ATATGCCTTC
GGTAAATCCG GCAACTTTAT GGCGAACTAT ACCTACGGCG TCTCGCTGCT GATCGCCAAC
GTGGCTATCG CCATCTCCGC TGTCGGCTAT GGTACCGAAC TGTTCGGCGC CGCGCTGACG
CCGCTCCAGA TCGGTCTGGC GACTATCGCC GTATTGTGGG TTTGTACCAT CGCAAACTTT
GGCGGCGCGC GTATTACCGG ACAGATCAGT AGCGTTACCG TTTGGGGCGT CATCATTCCG
GTTGTCGGCC TGTGCATCAT TGGCTGGTTC TGGTTTAGCC CCAGCATGTA CGTAGCGTCA
TGGAACCCGC ACCATGTTCC GTTCTTTAGC GCGGTCGGTT CTTCCATCGC CATGACGTTG
TGGGCATTTC TTGGACTGGA ATCCGCCTGC GCCAACGCAG ACGTGGTCGA GAATCCGGAA
AAGAACGTCC CCATCGCGGT ACTGGGCGGT ACGCTGGGCG CGGCGGTCAT CTATATCGTT
TCGACTAACG TGATTGCCGG GATTGTGCCG AACATGGATC TGGCGAACTC CACGGCGCCG
TTTGGTCTGG CGTTTGCACA GATGTTCACG CCTGCGGTAG GTAAAGTGAT CATGGCGCTG
ATGGTAATGT CCTGCTGCGG CTCGCTGCTG GGCTGGCAGT TCACTATCGC TCAGGTCTTT
AAATCCTCCG CTGACGAAGG CTATTTCCCG AAAGTCTTCT CTCGTGTAAC GAAAGTCGAC
GCGCCGGTTC AGGGGATGTT GATTATTGTG ATTATTCAGA CTGGCCTGTC GCTGATGACC
ATTAGCCCGT CGCTGAATAG TCAGTTTAAC GTCCTGGTTA ACCTGGCGGT GGTGACGAAC
ATTATTCCGT ATATTCTGTC GATGGCCGCG CTGGTTATCA TTCAGAAAAT GGCGAATGTG
CCGTCATCAA AAGCGAAAGT CGCTAACTTC GTGGCCTTCG TTGGCGCCAT GTATAGCTTC
TACGCGCTCT ATTCCTCCGG TGAAGAAGCC ATGCTGTACG GCTCAATTGT GACCTTCCTC
GGCTGGACGT TATACGGCCT GGTCTCACCG CGTTTTGAAT TGAAAAATAA ACACGGCTGA
|
|---|
| Protein sequence | MSKPKSNKMG VVQLTILTMV NMMGSGIIML PTKLSEVGTI SIISWLVTAV GSMALAWAFA
KCGMFSRKSG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELFGAALT
PLQIGLATIA VLWVCTIANF GGARITGQIS SVTVWGVIIP VVGLCIIGWF WFSPSMYVAS
WNPHHVPFFS AVGSSIAMTL WAFLGLESAC ANADVVENPE KNVPIAVLGG TLGAAVIYIV
STNVIAGIVP NMDLANSTAP FGLAFAQMFT PAVGKVIMAL MVMSCCGSLL GWQFTIAQVF
KSSADEGYFP KVFSRVTKVD APVQGMLIIV IIQTGLSLMT ISPSLNSQFN VLVNLAVVTN
IIPYILSMAA LVIIQKMANV PSSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL
GWTLYGLVSP RFELKNKHG
|
|---|
| |