Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0741 |
Symbol | dpiA |
ID | 6488419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 738086 |
End bp | 738766 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740994 |
Product | two-component response regulator DpiA |
Protein accession | YP_002044659 |
Protein GI | 194448405 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.21792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC CATTAACCCT ATTGATCGTT GAGGATGAAA CGCTGCTGGC GGAAATGCAC GCAGAATATA TCCGCCATAT TCCTGGCTTT AACCAGATAT GGCTGGCGGG CAATCTGGCG CAGGCGAGAA TGATGATTGA CCGGTTCAAA CCTGGATTAA TTCTGTTAGA TAATTATCTG CCGGATGGGA AGGGGATTAC GCTGCTGCAT GAATTAATGC AGTCGCGCTA TCCCGGCGGC GTCGTGTTTA CGACCGCCGC CAGTGACATG GAGACGGTAG CGGAAGCGGT ACGTAGCGGT GCGTTTGATT ATCTGGTCAA ACCTATTGCT TATGAGCGTT TGGGGCAGAC GCTGACCCGC TATCAACAGC GCAGACGTAT GCTGGCGAGC GCGGATAGCG CAAGTCAGAA GCAGATAGAT GAAATGTTCA ACGCCTATGC GCGCGGCGAA CCGAAAGGGG ATTTGCCGAC CGGTATTGAT GCCTTAACCC TTAATGCGGT GATGAAGCTG TTTGCCGATC CAACCGTACG CCATACGGCT GAAACGGTCG CGCAGGCCTT AACGATAAGC CGCACCACAT CCCGACGCTA CCTGGAATAT TGCGCGAGTC GGCACCTGAT TGTCGCAGAG ATTATTCATG GCAAAGTGGG CAGGCCGCAG CGTATTTACC ACGGCGGCTA A
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Protein sequence | MTEPLTLLIV EDETLLAEMH AEYIRHIPGF NQIWLAGNLA QARMMIDRFK PGLILLDNYL PDGKGITLLH ELMQSRYPGG VVFTTAASDM ETVAEAVRSG AFDYLVKPIA YERLGQTLTR YQQRRRMLAS ADSASQKQID EMFNAYARGE PKGDLPTGID ALTLNAVMKL FADPTVRHTA ETVAQALTIS RTTSRRYLEY CASRHLIVAE IIHGKVGRPQ RIYHGG
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