| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0644 |
|---|
| Symbol | ppiB |
|---|
| ID | 6488812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 645701 |
|---|
| End bp | 646195 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642740902 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase B (rotamase B) |
|---|
| Protein accession | YP_002044569 |
|---|
| Protein GI | 194451123 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00153715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACTT TCCACACTAA TCACGGCGAT ATCGTAATCA AAACCTTTGA TGATAAAGCG
CCTGAAACAG TTAAAAACTT CCTGGACTAC TGCCGCGAAG GTTTTTACAA CAACACCATT
TTCCACCGTG TGATTAACGG TTTTATGATT CAGGGCGGCG GCTTTGAGCC GGGCATGAAA
CAGAAAGCCA CCAAAGAGGC GATCAAAAAC GAAGCCAACA ATGGTCTGAA AAATACCCGT
GGTACGCTGG CAATGGCGCG TACTCAGGCG CCACACTCGG CTACCGCGCA ATTCTTCATC
AACGTGGCAG ACAACGACTT CCTGAACTTC TCCGGCGAAA GTCTGCAGGG CTGGGGCTAC
TGCGTCTTTG CGGAAGTCGT AGAAGGTATG GACGTGGTAG ATAAAATCAA AGGCGTCGCC
ACTGGCCGTA GCGGTATGCA CCAGGACGTA CCAAAAGAAG ACGTCATCAT TGAAAACGTG
ACCGTCAGCG AGTAA
|
|---|
| Protein sequence | MVTFHTNHGD IVIKTFDDKA PETVKNFLDY CREGFYNNTI FHRVINGFMI QGGGFEPGMK
QKATKEAIKN EANNGLKNTR GTLAMARTQA PHSATAQFFI NVADNDFLNF SGESLQGWGY
CVFAEVVEGM DVVDKIKGVA TGRSGMHQDV PKEDVIIENV TVSE
|
|---|
| |