Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0465 |
Symbol | prpE |
ID | 6492104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 468814 |
End bp | 470700 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642740734 |
Product | propionyl-CoA synthetase |
Protein accession | YP_002044401 |
Protein GI | 194448718 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0182759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.000616276 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTTTA GCGAATTTTA TCAGCGTTCC ATTAACGAAC CGGAGGCGTT CTGGGCCGAG CAGGCCCGAC GTATCGACTG GCGACAGCCG TTTACGCAGA CGCTGGATCA TAGCCGCCCA CCGTTTGCCC GCTGGTTTTG CGACGGTACC ACTAACTTAT GTCATAACGC CGTTGACCGC TGGCTGGATA AACAGCCGGA GGCGCTGGCG CTGATTGCCG TCTCATCAGA GACCGATGAA GAGCGCACAT TTACCTTCAG CCAGTTGCAT GATGAAGTCA ACATTGTGGC CGCCATGTTG CTGTCGCTGG GCGTGCAGCG TGGCGATCGC GTATTGGTCT ATATGCCGAT GATTGCCGAA GCGCAGATAA CCCTGCTGGC CTGTGCGCGC ATTGGCGCGA TCCATTCGGT GGTCTTTGGC GGTTTTGCCT CGCACAGCGT GGCGGCGCGC ATTGACGATG CCAGACCGGC GCTGATTGTG TCGGCGGATG CTGGAGCGCG GGGCGGTAAA ATCCTGCCGT ATAAAAAGCT GCTTGATGAC GCTATTGCGC AGGCGCAGCA TCAGCCGAAA CACGTTCTGC TGGTGGACAG AGGGCTGGCG AAAATGGCGT GGGTGGATGG GCGCGATCTG GATTTTGCCA CGTTGCGCCA GCAGCATCTC GGTGCGAGCG TGCCGGTGGC GTGGCTGGAA TCCAATGAAA CCTCGTGCAT TCTTTACACC TCCGGCACTA CCGGCAAACC GAAAGGCGTC CAGCGCGACG TCGGCGGTTA TGCGGTGGCG CTGGCAACCT CGATGGACAC CATTTTTGGC GGCAAGGCGG GCGGCGTATT CTTTTGCGCA TCGGATATCG GCTGGGTCGT CGGCCACTCC TATATCGTTT ACGCGCCGCT GCTGGCAGGC ATGGCGACTA TTGTTTACGA AGGACTGCCG ACGTACCCGG ACTGCGGGGT CTGGTGGAAA ATTGTCGAGA AATACCAGGT TAACCGGATG TTTTCCGCCC CGACCGCGAT TCGCGTGCTG AAAAAATTCC CGACGGCGCA AATCCGCAAT CACGATCTCT CCTCGCTGGA GGCGCTTTAT CTGGCCGGTG AGCCGCTGGA CGAGCCGACG GCCAGTTGGG TGACGGAGAC GCTGGGCGTA CCGGTCATCG ACAATTATTG GCAGACGGAG TCCGGCTGGC CGATCATGGC GCTGGCCCGC GCGCTGGACG ACAGGCCGTC GCGTCTGGGA AGTCCCGGCG TGCCGATGTA CGGTTATAAC GTCCAGCTAC TCAATGAAGT CACCGGCGAA CCTTGCGGCA TAAATGAAAA GGGGATGCTG GTGATCGAAG GGCCGCTGCC GCCGGGCTGT ATTCAGACTA TTTGGGGCGA CGATGCGCGT TTTGTGAAGA CTTACTGGTC GCTGTTTAAC CGTCAGGTTT ATGCCACTTT CGACTGGGGA ATCCGCGACG CCGAGGGGTA TTACTTTATT CTGGGCCGTA CCGATGATGT GATTAATATT GCGGGTCATC GGCTGGGGAC GCGAGAAATA GAAGAAAGTA TCTCCAGCTA CCCGAACGTA GCGGAAGTGG CGGTAGTGGG GATAAAAGAC GCTCTGAAAG GGCAGGTAGC GGTGGCGTTT GTCATTCCGA AGCAGAGCGA TACGCTGGCG GATCGCGAGG CGGCGCGCGA CGAGGAAAAC GCGATCATGG CGCTGGTGGA CAACCAGATC GGTCACTTTG GTCGTCCGGC GCATGTCTGG TTTGTTTCGC AGCTCCCCAA AACGCGTTCC GGAAAGATGC TTCGCCGCAC GATCCAGGCG ATCTGCGAAG GCCGCGATCC GGGCGATCTG ACAACCATTG ACGATCCCGC GTCGTTGCAG CAAATTCGCC AGGCGATCGA AGAATAG
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Protein sequence | MSFSEFYQRS INEPEAFWAE QARRIDWRQP FTQTLDHSRP PFARWFCDGT TNLCHNAVDR WLDKQPEALA LIAVSSETDE ERTFTFSQLH DEVNIVAAML LSLGVQRGDR VLVYMPMIAE AQITLLACAR IGAIHSVVFG GFASHSVAAR IDDARPALIV SADAGARGGK ILPYKKLLDD AIAQAQHQPK HVLLVDRGLA KMAWVDGRDL DFATLRQQHL GASVPVAWLE SNETSCILYT SGTTGKPKGV QRDVGGYAVA LATSMDTIFG GKAGGVFFCA SDIGWVVGHS YIVYAPLLAG MATIVYEGLP TYPDCGVWWK IVEKYQVNRM FSAPTAIRVL KKFPTAQIRN HDLSSLEALY LAGEPLDEPT ASWVTETLGV PVIDNYWQTE SGWPIMALAR ALDDRPSRLG SPGVPMYGYN VQLLNEVTGE PCGINEKGML VIEGPLPPGC IQTIWGDDAR FVKTYWSLFN RQVYATFDWG IRDAEGYYFI LGRTDDVINI AGHRLGTREI EESISSYPNV AEVAVVGIKD ALKGQVAVAF VIPKQSDTLA DREAARDEEN AIMALVDNQI GHFGRPAHVW FVSQLPKTRS GKMLRRTIQA ICEGRDPGDL TTIDDPASLQ QIRQAIEE
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