| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0439 |
|---|
| Symbol | |
|---|
| ID | 6491481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 437515 |
|---|
| End bp | 438039 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642740708 |
|---|
| Product | attachment invasion locus protein |
|---|
| Protein accession | YP_002044375 |
|---|
| Protein GI | 194450962 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.000000617037 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAC GGTCTTCGTT CCTTGTTTTT TTAGGTTTAT TATTAGCGTC ACCTTTAGCT
TTGGCTAACG ATCAGCACAC CGTATCGTTT GGTTATGCAC AAACTCATCT CAGTTCATTG
AAAAATAGCG ATAGCAAAGA TCTGCGAGGC TTTAATTTTA AATATCGTTA CGAGTTTAAT
GAGACCTGGG GGATGTTAGG CTCATTCACC GCGACGCGCA ATGAAATGGA GAATTACACC
TGGAAAGAGG GGAAGTTGCA TAAAAATGGT TCCGATTCTG TGGACTATGG TTCTTTGATG
TTTGGACCAA CATATCGTTT TAATGACTAT GTGAGCCTGT ACGGCAATGC GGGTATAGCG
ACGATGAAAT TTAATAAACA CTCAAAAGAA GAGTCCTTTG CCTACGGCGC TGGCGTAATA
TTTAATCCAG TTAAGAGTAT ATCTATCGAT GCATCATGGG AAGCCAGTCG TTTCTTCGCT
GTGGATACCA ATACATTTGG TGTCAGCGTA GGTTATCGCT TCTGA
|
|---|
| Protein sequence | MKRRSSFLVF LGLLLASPLA LANDQHTVSF GYAQTHLSSL KNSDSKDLRG FNFKYRYEFN
ETWGMLGSFT ATRNEMENYT WKEGKLHKNG SDSVDYGSLM FGPTYRFNDY VSLYGNAGIA
TMKFNKHSKE ESFAYGAGVI FNPVKSISID ASWEASRFFA VDTNTFGVSV GYRF
|
|---|
| |