Gene SeHA_C0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0308 
Symbol 
ID6487780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp316880 
End bp317704 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID642740585 
Producthypothetical protein 
Protein accessionYP_002044253 
Protein GI194448663 
COG category[R] General function prediction only 
COG ID[COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.914397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTGACACGCT TCCTGCTACC CTGTCCGCGC TGATACAGGA ATACTCTTTT 
GCGGAGGGGA TTCAGATGGC GGAGCAGCAG GTTCGGGAAA ATCCGGCGAA AGCGCTCTGC
CGCCACAGCC TGTTTCAGTT GCTGTGTGTG GCCGGAGACT GGTCGCGGGC GCTACACCAG
CTTCAGCTAT GCGCCAGGAT GGAGGCCAAT TATACCCAGG AGGCCCGGCT GTACCGGGAG
CTGGTTCGCT GCGAAATGTT CCGCCACACC GTTTTTCAGG GTGAACAACG ACCCGGTTTT
CTTCTGCCGC AGCCCGTTTG GGTGGAGTCA CTGCTGGCGG CACTCGCCTG TCATGACGAT
ACCGGTGAGG TTGATAAACA CCGTAATACC GCACTGGAAG CCATAACAGA TACTGGCGGA
CAGTGGAACG GCGGCGCATT TGACTGGGCG AGCGACAGCG ATTCCCGCCT TGGCCCGGTA
CTTGAGCTGG TCACCGGCGG CGTGTATATC TGGCTGCCGT TTTCGCAAAT ACGCTCGCTG
GAATCGCCGC AACCGACGCG CCTGACCGAT CTGCTGTGGA AACCCGTTAA TATCACCCTG
GTGAATGGCG ATACGCACGG CGCCTGGCTC TTTACCCGTT ACAGCGGTTC GGAAAGTGCA
TCCGACGCCC TGCGTCTGTG CCGGGAAACC GCCTGGCAGG ACGGCCCCGG CGAAACCACC
GTGCGAGCGC TGGGGCAGAA AGTGTGGCTG ACCAGCCACG GCGATATCAG CCTGCTGGAC
ATGGCCCATT GTACCTTTCA TGCTCAGGAA AACGATGGCG CATGA
 
Protein sequence
MKKTDTLPAT LSALIQEYSF AEGIQMAEQQ VRENPAKALC RHSLFQLLCV AGDWSRALHQ 
LQLCARMEAN YTQEARLYRE LVRCEMFRHT VFQGEQRPGF LLPQPVWVES LLAALACHDD
TGEVDKHRNT ALEAITDTGG QWNGGAFDWA SDSDSRLGPV LELVTGGVYI WLPFSQIRSL
ESPQPTRLTD LLWKPVNITL VNGDTHGAWL FTRYSGSESA SDALRLCRET AWQDGPGETT
VRALGQKVWL TSHGDISLLD MAHCTFHAQE NDGA