Gene SeHA_C0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0250 
SymboldapD 
ID6491525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp257024 
End bp257848 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID642740529 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_002044203 
Protein GI194449938 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TACAGAACGT TATTGAGACC GCTTTTGAGC GCCGCGCCGA TATTACGCCG 
GCTAATGTAG ATACCGTGAC CCGAGAGGCG GTAAACCAGG TCATTTCTCT ACTTGATTCC
GGCGCGCTGC GTGTCGCAGA AAAAATCGAC GGTCAGTGGG TCACTCACCA GTGGTTGAAG
AAAGCGGTTC TGCTCTCTTT CCGTATTAAC GATAACCAGG TTATCGACGG TGGGGAAAGC
CGCTACTTCG ATAAAGTCCC GATGAAATTC GCTGATTACG ACGAAGCGCG TTTTCAGAAA
GAAGGCTTCC GCGTCGTTCC GCCTGCGGCC GTTCGTCAGG GCGCATTTAT CGCCCGCAAC
ACCGTGTTGA TGCCGTCTTA CGTTAACATC GGCGCCTACG TTGACGAAGG CACCATGGTT
GACACCTGGG CGACGGTGGG TTCCTGCGCG CAGATTGGTA AAAATGTTCA CCTTTCCGGC
GGCGTAGGTA TCGGCGGCGT ACTGGAGCCG TTGCAGGCTA ACCCGACCAT CATTGAAGAC
AACTGCTTTA TTGGCGCGCG TTCTGAAGTC GTGGAAGGCG TCATTGTCGA AGAAGGTTCC
GTCATTTCCA TGGGGGTATA CCTCGGCCAG AGCACCAAAA TCTACGATCG CGAAACCGGT
GAAGTTCACT ATGGCCGCGT ACCGGCGGGC TCCGTGGTCG TTTCCGGCAA CCTGCCGTCA
AAAGACGGCA AGTACAGTTT GTACTGCGCG GTGATCGTGA AAAAAGTCGA CGCCAAAACG
CGTGGAAAAG TGGGCATTAA CGAATTATTG CGCACTATTG ATTAA
 
Protein sequence
MQQLQNVIET AFERRADITP ANVDTVTREA VNQVISLLDS GALRVAEKID GQWVTHQWLK 
KAVLLSFRIN DNQVIDGGES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYLGQ STKIYDRETG EVHYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID