Gene SeHA_C0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0222 
SymbolmrcB 
ID6490581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp228607 
End bp231129 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content57% 
IMG OID642740501 
Productpenicillin-binding protein 1b 
Protein accessionYP_002044175 
Protein GI194450105 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGA ATGACCGCGA GCCGATTGGA CGTAAGGGGA AACCGTCACG TCCTGTGAAA 
CAAAAGGTGA GCCGTCGTCG GCAGCATGAC GACGATTATG ATGATGACTA TGAGGATGAA
GAACCGATGC CGCGTAAAGG TAAGGGCAAA GGGCGTAAGC CTCGTGGCAA GCGCGGCTGG
CTGTGGCTAT TGCTAAAACT GTTTATCGTT TTTGTGGTGC TGTTCGCCAT TTACGGCGTC
TATCTGGATC AAAAAATCCG CAGCCGTATT GATGGCAAGG TCTGGCAGCT TCCGGCGGCG
GTATATGGCC GGATGGTGAA CCTTGAGCCA GACATGCCTG TCAGCAAAAA CGAGATGGTG
AAATTGCTGG AAGCGACGCA GTATCGTCTG GTGACGAAGA TGACCCGTCC CGGCGAATTT
ACCGTGCAGG CCAATAGCAT TGAGATGATC CGTCGTCCGT TTGACTTCCC GGACAGCAAA
GAAGGGCAGG TGCGCGCGCG GCTGACGTTC AGTGACGGGC GTCTGGAAAC CATCGTCAAT
CTGGATAACA ACCGCCAGTT TGGCTTCTTC CGCCTCGATC CGCGGCTTAT CACCATGCTT
TCTTCGCCAA ATGGCGAGCA GCGTTTATTC GTCCCGCGCA GCGGCTTCCC GGATCTGCTG
GTCGATACGC TGTTGGCGAC GGAAGACCGT CATTTCTATG AGCATGATGG CATTAGTCTT
TACTCTATCG GGCGTGCGGT ACTGGCCAAC CTGACGGCGG GACGCACGGT GCAGGGGGCC
AGTACGCTGA CCCAGCAGCT GGTGAAGAAC CTGTTCCTCT CCAGCGAAAG ATCATACTGG
CGTAAAGCGA ATGAAGCCTA CATGGCGCTG ATCATGGATG CCCGTTACAG TAAAGATCGT
ATTCTTGAGC TGTACATGAA CGAGGTCTAC CTCGGTCAAA GCGGGGATAA TGAAATTCGC
GGTTTTCCGC TGGCGAGCCT GTATTACTTT GGTCGTCCGG TAGAGGAACT GAGCCTCGAT
CAGCAGGCGT TACTGGTGGG GATGGTAAAA GGGGCGTCGA TTTATAACCC GTGGCGCAAC
CCGAAACTGG CGCTGGAGCG TCGTAACCTG GTGTTACGCC TGTTACAGCA GCAGAAAATC
ATCGATCAGG AACTCTATGA CATGCTGAGC GCGCGTCCGC TTGGCGTACA GCCGCGCGGC
GGCGTTATTT CACCGCAGCC AGCGTTTATG CAGATGGTTC GTCAGGAACT GCAGGCGAAG
CTGGGGGATA AAATTAAAGA TCTCTCCGGC GTGAAGATCT TCACCACCTT TGACTCCGTG
GCGCAGGATG CCGCAGAAAA AGCCGTTGTC GAAGGTATTC CGGCGTTGAA GAAGCAGCGT
AAATTGAGCG ATCTGGAAAC CGCGATGGTG GTGGTGGATC GCTTTAGCGG CGAGGTGCGC
GCGATGGTTG GCGGGGCGGA GCCGCAGTAT GCCGGCTATA ACCGTGCCAT GCAGGCGCGC
CGTTCCATCG GGTCGCTGGC GAAACCGGCG ACCTATCTGA CCGCGTTAAG TCAGCCGAAC
TTATACCGTC TGAACACCTG GATTGCCGAT GCGCCGATTT CTCTGCGCCA GCCGAATGGT
CAGGTCTGGT CGCCGCAGAA CGACGATCAT CGCTACAGCG AAAGCGGGAA AGTGATGCTG
GTGGATGCGT TAACTCGCTC AATGAACGTA CCGACGGTCA ATCTGGGGAT GGCGTTAGGT
TTACCGGCGG TAACCGATAC CTGGACGAAG CTCGGCGTGC CGAAAGATCA GCTCAATCCG
GTTCCGGCTA TGCTGTTAGG AGCGCTGAAC CTGACGCCGA TCGAAGTGGC GCAGGCGTTC
CAGACTATCG CCAGCGGCGG AAATCGCGCG CCGTTATCAG CGCTGCGTTC AGTTATTGCG
GAAGATGGTA AAGTGCTGTA CCAAAGTTAT CCGCAAGCTG AACGCGCTGT ACCGGCACAG
GCGGCTTACC TGACGCTCTG GACAATGCAG CAGGTCGTCC AGCGTGGTAC GGGGCGTCAG
CTTGGCGCGA AATATCCGGG TCTGCATCTG GCCGGTAAAA CCGGGACGAC AAACAACAAT
GTCGATACCT GGTTTGCCGG TATCGACGGC AGCCAGGTGA CTATCACCTG GGTAGGCCGT
GATAACAACC AGCCGACGAA ATTGTACGGC GCCAGCGGCG CGATGGCGAT TTACCAGCGC
TATCTGGCGA ACCAGACGCC GACGCCTTTA GTTCTGACGC CGCCGGAAGA TGTGGTGGAT
ATGGGCGTTG ATTACGACGG TAATTTTGTC TGTAGCGGCG GTATGCGCAC TCTGCCGGTC
TGGACGGACG ATCCAAATAC GCTGTGCCAG CAGGGCGAGA TGATGCAGCA GCAACAGCAG
CCGTCAGGCA ATCCGTTCGA TCAGTCGTCT CAGCCGCAGC AGCCTGCGCA GCAACAGCCG
CCGAAAGAAG AGAAGAGCGA CGGCGTTGCC GGCTGGATTA AGGAGATGTT CGGCGGCAAT
TAA
 
Protein sequence
MAGNDREPIG RKGKPSRPVK QKVSRRRQHD DDYDDDYEDE EPMPRKGKGK GRKPRGKRGW 
LWLLLKLFIV FVVLFAIYGV YLDQKIRSRI DGKVWQLPAA VYGRMVNLEP DMPVSKNEMV
KLLEATQYRL VTKMTRPGEF TVQANSIEMI RRPFDFPDSK EGQVRARLTF SDGRLETIVN
LDNNRQFGFF RLDPRLITML SSPNGEQRLF VPRSGFPDLL VDTLLATEDR HFYEHDGISL
YSIGRAVLAN LTAGRTVQGA STLTQQLVKN LFLSSERSYW RKANEAYMAL IMDARYSKDR
ILELYMNEVY LGQSGDNEIR GFPLASLYYF GRPVEELSLD QQALLVGMVK GASIYNPWRN
PKLALERRNL VLRLLQQQKI IDQELYDMLS ARPLGVQPRG GVISPQPAFM QMVRQELQAK
LGDKIKDLSG VKIFTTFDSV AQDAAEKAVV EGIPALKKQR KLSDLETAMV VVDRFSGEVR
AMVGGAEPQY AGYNRAMQAR RSIGSLAKPA TYLTALSQPN LYRLNTWIAD APISLRQPNG
QVWSPQNDDH RYSESGKVML VDALTRSMNV PTVNLGMALG LPAVTDTWTK LGVPKDQLNP
VPAMLLGALN LTPIEVAQAF QTIASGGNRA PLSALRSVIA EDGKVLYQSY PQAERAVPAQ
AAYLTLWTMQ QVVQRGTGRQ LGAKYPGLHL AGKTGTTNNN VDTWFAGIDG SQVTITWVGR
DNNQPTKLYG ASGAMAIYQR YLANQTPTPL VLTPPEDVVD MGVDYDGNFV CSGGMRTLPV
WTDDPNTLCQ QGEMMQQQQQ PSGNPFDQSS QPQQPAQQQP PKEEKSDGVA GWIKEMFGGN