Gene SeHA_C0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0172 
Symbol 
ID6491091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp179046 
End bp180671 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content57% 
IMG OID642740454 
Producthypothetical protein 
Protein accessionYP_002044128 
Protein GI194449777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC CCTTTAAACC CCATCTCATT GCCCTTGTGT GCAGTGCCGG GTTATTTGCC 
GCTTCGGGCG TACTGTATGT TAAAAGCCGC GCTCCCGAAG CGCCCGCGCA GGCGGCAGCT 
CCCGCCTCTG AGCCAACGCA GACCGCTGTG CCCGCGCCTG TCGCGAAAAC GACCTTTACC 
ACTGCGCAAA TTGATCAATG GGTCGCGCCT GTCGCGCTTT ATCCCGATGC CCTGCTTTCG 
CAGGTGCTCA TGGCCTCCAC CTACCCGGCG AACGTAGTTC AGGCCGTCCA GTGGTCGCGC 
GATAACCCTA CGCTGCAGGG CGATGCCGCT ATTCAGGCGG TGGCCAGCCA ACCGTGGGAC 
CCCAGCGTCA AATCGCTGGT CGCCTTTCCC CAGTTGATGG CGCTTATGGG CGAGAATCCG 
CAATGGGTGC AAAACCTGGG CGATGCGTTC TTAGCCCAGC CACAGGATGT GATGGATGCG 
GTGCAAAGGC TGCGCCTGCT CGCTCAACAA ACCGGTTCGC TAAAATCAAC GCCGCAGCAA 
ACCGTCACCA GCGTGCCGAA GTCCAGCGCT TCTACCGCCG TCACGACAAC AACCACCACC 
ACATCCGCCA GTACGCCAGC AACACCGTCG ACCGTTATAA AAATTGAACC CGCGAATCCG 
CAGGTGGTGT ACGTGCCGAA CTATAACCCC GCGACGGTGT ATGGCGCCTG GCCCAATACC 
GCTTATCCGC CGGTGTATTT ACCGCCCCCT CCGGGGCAGC AGTTTGCCGA TAGTTTTGTT 
AAAGGTTTTG GTTATAGTCT GGGCGTCGCC ACCACCTATG CGTTGTTCAG CAGCATAGAC 
TGGGATGACG ACGATCATCA CCACCATGAC GACGACCATC ATGATGATGA TTACCATCAT 
GGTGGTAACG GTTATCAACA TAATGGCGAT AATATCAACA TCAATGTCAA TAATTTCAAC 
CGGATATCCG GGCAAAACCT GCCGGGCCAA ACGATGGGCT GGCAGCATAA TCCCGCCTGG 
CGCAATGGCG TCCCCTATCC GAATAATACC GTTGCGCAAC GGTTCCATCC CACCAATGTT 
AGCGGCGGGT TAAGCGCAAC GCAGCAAGCG CCAGTGTCTC GCGACAGTCA GCGCCAGGCG 
GCCATGACGC AATTTCAACA GCGCAGCCAT ACGGCCAACG CTTCTTTGCC AGCGCCAGGC 
ACCCGCGATG CCCAGCGTAA GGCGGCATCG CAGCAGTTAA ATCAAATTGC CCAGCGTAAT 
AATTACCGTG GCTATGACGG AACACAAAAC AGCAGTCGTC GCGAGGCGGC GCAGCAGACA 
CTGAATAAAT CCACCACGCA GCAGCATCGT TCCGAGCTGA AGGCTAAAGC CCAGCAGCAC 
CCTGTTTCAC AACAGCAGAG AGACACCGCC CGCCAGCGTA TTGAATCCTC TACGCCGCAA 
CAGCGTCAGG CATTTCGCCA GAATATGCAC GCCAATGTGT TTAGCGGGAA CGACAGTCGA 
TCGCCGTCAT GGCAATCGCA ACAGCTACGC GGCCTGGAAA GCCGTCGCGG CAGTCACTTA 
AACACCGAGC AACGCGCCGC CGCGCGGGAA CATTTTTCTG AACATCATGA ATTTCATCGC 
CGTTAA
 
Protein sequence
MTLPFKPHLI ALVCSAGLFA ASGVLYVKSR APEAPAQAAA PASEPTQTAV PAPVAKTTFT 
TAQIDQWVAP VALYPDALLS QVLMASTYPA NVVQAVQWSR DNPTLQGDAA IQAVASQPWD 
PSVKSLVAFP QLMALMGENP QWVQNLGDAF LAQPQDVMDA VQRLRLLAQQ TGSLKSTPQQ 
TVTSVPKSSA STAVTTTTTT TSASTPATPS TVIKIEPANP QVVYVPNYNP ATVYGAWPNT 
AYPPVYLPPP PGQQFADSFV KGFGYSLGVA TTYALFSSID WDDDDHHHHD DDHHDDDYHH 
GGNGYQHNGD NININVNNFN RISGQNLPGQ TMGWQHNPAW RNGVPYPNNT VAQRFHPTNV 
SGGLSATQQA PVSRDSQRQA AMTQFQQRSH TANASLPAPG TRDAQRKAAS QQLNQIAQRN 
NYRGYDGTQN SSRREAAQQT LNKSTTQQHR SELKAKAQQH PVSQQQRDTA RQRIESSTPQ 
QRQAFRQNMH ANVFSGNDSR SPSWQSQQLR GLESRRGSHL NTEQRAAARE HFSEHHEFHR 
R