| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0146 |
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| Symbol | lpxC |
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| ID | 6490785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 152134 |
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| End bp | 153051 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642740430 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_002044104 |
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| Protein GI | 194448520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0011273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0000138304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAC AAAGGACACT TAAACGTATC GTTCAGGCGA CTGGCGTCGG TTTACACACC
GGCAAAAAAG TCACCCTGAC ATTACGCCCT GCGCCGGCCA ATACCGGGGT CATCTATCGT
CGCACCGACT TGAATCCACC GGTAGATTTC CCGGCCGATG CCAAATCTGT GCGTGATACC
ATGCTCTGTA CGTGTCTGGT GAATGAGCAT GATGTACGGA TTTCAACCGT TGAGCACCTG
AACGCTGCTC TGGCGGGCTT AGGTATCGAT AACATCGTTA TTGAAGTTAA CGCCCCGGAA
ATCCCGATCA TGGATGGCAG TGCCGCTCCG TTTGTCTACT TGCTGCTTGA TGCCGGTATT
GATGAACTGA ACTGCGCCAA AAAATTCGTA CGCATCAAAG AGACTGTTCG GGTTGAAGAT
GGCGATAAAT GGGCTGAATT CAGACCGTAC AATGGTTTTA CGTTGGATTT CACCATCGAC
TTTAACCATC CGGCGATCGA TTCCAGCAGC CAGCGCTACG CGATGAACTT CTCTGCGGAT
GCGTTCATGC GCCAGATCAG CCGTGCGCGT ACCTTCGGTT TTATGCGTGA TATCGAATAT
CTGCAGTCCC GCGGCCTGTG CCTGGGCGGC AGCTTCGATT GTGCCATCGT TGTTGACGAT
TATCGCGTAT TGAACGAAGA CGGCCTGCGT TTTGAAGATG AATTCGTTCG TCACAAAATG
CTCGACGCGA TCGGTGACTT GTTCATGTGT GGTCACAATA TTATTGGTGC GTTTACCGCG
TATAAATCCG GTCACGCATT GAATAACAAA TTGTTACAGG CAGTCCTGGC AAAACAGGAA
GCCTGGGAAT TTGTGACCTT CCAGGACGAC GCAGAACTGC CGTTGGCTTT CAAAGCGCCT
TCGACGGTAC TGGCATAA
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| Protein sequence | MIKQRTLKRI VQATGVGLHT GKKVTLTLRP APANTGVIYR RTDLNPPVDF PADAKSVRDT
MLCTCLVNEH DVRISTVEHL NAALAGLGID NIVIEVNAPE IPIMDGSAAP FVYLLLDAGI
DELNCAKKFV RIKETVRVED GDKWAEFRPY NGFTLDFTID FNHPAIDSSS QRYAMNFSAD
AFMRQISRAR TFGFMRDIEY LQSRGLCLGG SFDCAIVVDD YRVLNEDGLR FEDEFVRHKM
LDAIGDLFMC GHNIIGAFTA YKSGHALNNK LLQAVLAKQE AWEFVTFQDD AELPLAFKAP
STVLA
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