Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0102 |
Symbol | |
ID | 6487944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 104731 |
End bp | 105390 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642740390 |
Product | 23S rRNA/tRNA pseudouridine synthase A |
Protein accession | YP_002044064 |
Protein GI | 194448284 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.108549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGATGG AAAACTACAA TCCGCCGCAG GAACCCTGGC TGGTTATCCT GTATCAGGAT GAGCACATTA TGGTGGTCAA TAAGCCCAGC GGCCTGTTGT CCGTGCCGGG GCGTCTGGAA GCGCACAAAG ACAGCATTAT GACGCGTATC CAGCGCGACT ACCCGCAGGC AGAATCGGTG CATCGTCTGG ATATGGCCAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAG CGGGAGCTAA AACGCCAGTT CCGCGAACGT GAGCCGAAAA AGCAGTATGT AGCGCGCGTA TGGGGTCATC CCTCCCCGGC GGAAGGGCTG GTTGACTTAC CGCTCATCTG CGACTGGCCG AACCGGCCAA AGCAGAAAGT GTGTTATGAA ACCGGCAAAC CGGCGCAAAC GGAATATAAC GTGGTGGAGT TTGCGGCGGA TAATACCGCC CGCGTGGTGC TCAAGCCGAT CACCGGACGT TCGCATCAGC TTCGTGTGCA TATGCTGGCG TTAGGCCACC CGATTTTAGG CGATCGGTTT TACGCCTCGC CGGAAGCGTT GTCGCTGGCG CCGCGTTTGC AGTTACACGC CGAAATGCTG ACCATTACCC ATCCCGCTTA CGGTAACAGC ATGACGTTTA AAGTCCCGGC AGATTTTTAA
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Protein sequence | MGMENYNPPQ EPWLVILYQD EHIMVVNKPS GLLSVPGRLE AHKDSIMTRI QRDYPQAESV HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPSPAEGL VDLPLICDWP NRPKQKVCYE TGKPAQTEYN VVEFAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF YASPEALSLA PRLQLHAEML TITHPAYGNS MTFKVPADF
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