Gene SeHA_C0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0062 
SymbolcitC 
ID6490629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp64106 
End bp65137 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content54% 
IMG OID642740351 
Product[citrate (pro-3S)-lyase] ligase 
Protein accessionYP_002044025 
Protein GI194448979 
COG category[C] Energy production and conversion 
COG ID[COG3053] Citrate lyase synthetase 
TIGRFAM ID[TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.93415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTAA TATTTAAACG CATTTATTTG CAAAAGGATG TATTGCGTCG CGAGTCGGTC 
GCCATGTTTC TGGAGGGCGT GGGACTCGCC CTGGAAGACG ATTGTGAAAT CGCGGTATGC
GCATATTGGC AGGGTGAGAT AGTCGGGTGC GGTTCTCTGG CCGGGAACGT ACTGAAATGC
ATCGCCGTTT CCCCGGTTTT ACAAGGGGAA GGGCTCAGCC TCAAACTGCT GACTGAGCTG
CTTACATTGG CCTACGAGTT AAACCGCAGC GAGCTTTTCC TGTTCACTAA GCCGCAAAAT
CGGTTGCTGT TTTCTGGCGC GGGGTTTTGG CCCATTGCGC AGGCAGGTGA GCTGGCGGTG
TTAATGGAGA ACAGCAGTGA ACGGTTAGCG CGCTTTTGTC GCCAACTGGC GCTTTATCGT
CAACCGGGAA AAACGATCGG CGCCATCGTC ATGAACGCCA ATCCGTTTAC CTTGGGCCAC
CGTTATCTGG TGGAGCAAGC AGCGGCAGCC TGTGATTGGC TGCATCTGTT TGTGGTCAAA
GAAGATGCTT CATTTTTTTC CTATACCGAC CGTTGGGCGC TGATCGAACA AGGAATCGCG
GGCATTGACA ACGTCACGTT GCATTCCGGC TCCGCTTATA TGATCTCGCG TGCGACGTTT
CCCGGCTATT TCCTCAAAGA AAAAGGGGTT GTGGACGACT GCCATTGCCA GATCGATCTG
CAACTCTTCC GTGAACATCT GGCTCCAGCG CTGGGAATTA CCCATCGTTT TGTCGGCAGT
GAACCGTTTT GTCCTCTGAC CTGTGCCTAT AACCAGCGAA TGCACGACAT TTTGCACGAT
CCGAAGCGTA GCGGCCCGGT TATTGAGGTC GTCGAGCTGG CGCGGGTGGA GAAAAACGGC
ACGGCTATTT CCGCCTCTCG CGTCAGAAAA CTGTATAGCG AACGTAATTG GCCGGCAATA
AGCGCGTTGG TGCCTGCTGG CACCCTGGCA TATCTGCAGC GGCATGCCGC CAGACACACT
GAAACCATAT GA
 
Protein sequence
MNLIFKRIYL QKDVLRRESV AMFLEGVGLA LEDDCEIAVC AYWQGEIVGC GSLAGNVLKC 
IAVSPVLQGE GLSLKLLTEL LTLAYELNRS ELFLFTKPQN RLLFSGAGFW PIAQAGELAV
LMENSSERLA RFCRQLALYR QPGKTIGAIV MNANPFTLGH RYLVEQAAAA CDWLHLFVVK
EDASFFSYTD RWALIEQGIA GIDNVTLHSG SAYMISRATF PGYFLKEKGV VDDCHCQIDL
QLFREHLAPA LGITHRFVGS EPFCPLTCAY NQRMHDILHD PKRSGPVIEV VELARVEKNG
TAISASRVRK LYSERNWPAI SALVPAGTLA YLQRHAARHT ETI