Gene SeHA_C0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0028 
Symbol 
ID6489561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp30663 
End bp31178 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content49% 
IMG OID642740322 
Productfimbrial subunit 
Protein accessionYP_002043996 
Protein GI194450483 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.143965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGA TGCTGTGTCC ACAAATCAAT GCCAGCGCTG ACGACCTCGC TTATAACCTC 
GAATTTACCG GCACTATTGT GGCGCAAACC TGCGACATAG ATATTTCCAG CCTCAGTCAA
AGTATTGATT TAGGCCAGTT TGCGGTTGGC GATTTTCCTT CGACGGGAAC AACGACAAAA
TTTAAGCCCT TTAATATCAA CCTCAAAAAT TGTTCCCGAG GAATTGCCGG GGCGAAGATC
TGGTTTACCG GCGAACCCGA TCCGGACAAT CCCGCGCTAC TGGCGATAAC CGACACCGGA
ATGGGAAGCG GAAACATGTT AGCAAGCGGG GTTGGGGTGG AAATTCTGAA TGATGATCAG
GATACCATCA GTATCAATAA TGCCGACTCG GTGGTCTATC CGTTGAAAGC CGGACGCAAC
ACGCTGTCTT TTTATATTCG CTATAAATCG ACCCGGCCGA CGGTCACGTC CGGGAATGCG
ACGGCGGTCA TGTATTTCGA TATGCAGTAT GAATGA
 
Protein sequence
MGLMLCPQIN ASADDLAYNL EFTGTIVAQT CDIDISSLSQ SIDLGQFAVG DFPSTGTTTK 
FKPFNINLKN CSRGIAGAKI WFTGEPDPDN PALLAITDTG MGSGNMLASG VGVEILNDDQ
DTISINNADS VVYPLKAGRN TLSFYIRYKS TRPTVTSGNA TAVMYFDMQY E