Gene SeHA_A0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0031 
Symbol 
ID6487527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand+ 
Start bp16416 
End bp17195 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID642740195 
Productresolvase 
Protein accessionYP_002043869 
Protein GI194447254 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.131142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.303073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC TGCCGGCACC GATACACCAT GCCCGGGATG CCGCTCAGCT TCCTGTTGCC 
ATCGATTATC CGGCAGCGCT GGCACTCCGC CAGATGTCGA TGGTTCATGA TGAACTGCCA 
AAATACCTGC TGGCCCCTGA AGTGAGCGCC CTGCTCCATT ACGTCCCGGA TCTGCGCCGC 
AAGATGCTGC TGGCCACACT GTGGAACACC GGTGCACGCA TTAATGAAGC ACTGGCGCTG 
ACGCGGGGGG ATTTTTCGCT CACGCCTCCG TATCCGTTTG TGCAGCTGGC CACTCTGAAG 
CAGCGGACCG AAAAAGCCGC CAGGACGGCA GGAAGGATGC CCGCCGGTCA GCAGACTCAC 
CGGCTGGTTC CGCTCTCCGA CGCCTGGTAC GTCAGCCAGC TGCAGACGAT GGTGGCCACA 
CTGAAAATCC CCATGGAACG GCGTAATAAA CGAACAGGCA GGACAGAGAA AGCGCGGATC 
TGGGAAGTGA CGGACAGAAC GGTCAGGACC TGGATTGGGG AGGCGGTTGC CGCCGCTGCC 
GCTGATGGAG TGACGTTCTC TGTCCCGGTC ACGCCACATA CGTTCCGCCA TTCCTATGCG 
ATGCATATGC TGTATGCCGG TATACCGCTG AAGGTCCTGC AGAGTCTGAT GGGGCATAAG 
TCCATCAGCT CAACGGAGGT CTACACGAAG GTGTTTGCAC TGGATGTGGC TGCACGGCAC 
CGGGTGCAGT TTTCGATGCC TGAGTCCGAT GCGGTGTCTA TGCTCAAAAG AATTCCATAA
 
Protein sequence
MQHLPAPIHH ARDAAQLPVA IDYPAALALR QMSMVHDELP KYLLAPEVSA LLHYVPDLRR 
KMLLATLWNT GARINEALAL TRGDFSLTPP YPFVQLATLK QRTEKAARTA GRMPAGQQTH 
RLVPLSDAWY VSQLQTMVAT LKIPMERRNK RTGRTEKARI WEVTDRTVRT WIGEAVAAAA 
ADGVTFSVPV TPHTFRHSYA MHMLYAGIPL KVLQSLMGHK SISSTEVYTK VFALDVAARH 
RVQFSMPESD AVSMLKRIP