Gene SeD_B0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0048 
Symbol 
ID6870879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp26390 
End bp26974 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID642783196 
Producthypothetical protein 
Protein accessionYP_002213890 
Protein GI198241687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG CCATGTCCCG CCGGAAACGC ATACTGCTGA CGGGGAACTG TGAATATGAA 
CTGCTGGGGC TGTCACATCT GCTTGCCGGT ATGGGGTATG CCGTGGTGCG ACCGGAGATG 
TCACCTCCCG GGGCATATGA CCTGGCCCTG GTGGCACTGA GTGCGGAGCC GCTGGCCGGC 
TGGGGGCGGC ATCTGAAGGG TATCAGAATG CTGCACGCGG CCAGTCCGGT TCCCATGGTT 
GTTCTGGTAC CTTCGCGGCT GCAGGAAATG CGGCTCCTGA GAGGAACTGC GCAGGTTATC 
AGTGGCCGGG ACAGCCTCCT CCGGCTGCGT GACATGCTGC GTCAGGCGCT TGAGGGAAGA 
GCCGGGCCGG AAAGCTCAGG TGAACTGACT GAGTTGCGAA AGCGGACTCT GATATCCCTG 
TGTACGGCCA TAAACAGGAA TGCCTCACTG AAGGCGGCAT CACGCAAGGA TTATTACCTC 
CGGGCCTGCC TGGTGGAGTA TGCAGGGGTG GAGAACCTGC ATGTACTGTG CACGAGCGGC 
CTGTTACCCG GGGTGATTAC AGATGAAACC GGACAACGGT TCTGA
 
Protein sequence
MENAMSRRKR ILLTGNCEYE LLGLSHLLAG MGYAVVRPEM SPPGAYDLAL VALSAEPLAG 
WGRHLKGIRM LHAASPVPMV VLVPSRLQEM RLLRGTAQVI SGRDSLLRLR DMLRQALEGR 
AGPESSGELT ELRKRTLISL CTAINRNASL KAASRKDYYL RACLVEYAGV ENLHVLCTSG 
LLPGVITDET GQRF