Gene SeD_B0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0026 
Symbol 
ID6870856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp16656 
End bp17306 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content33% 
IMG OID642783177 
Productvirulence protein VsdE 
Protein accessionYP_002213871 
Protein GI198241655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value0.898227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTT CTGGTAGTGC GTCATCCCAA GATATAATAT CACGTATAAA TTCAAAAAAT 
ATCAATAATA ATGATTCAAA TGAAGTCAAG AGAATTAAAG ATGCGCTTTG TATTGAATCA 
AAAGAGAGAA TTTTGTATCC ACAAAATTTG AGTCGAGATA ATTTAAAACA AATGGCTAGA 
TATGTAAATA ATACATACGT CCATTACTCT GGGAACTGCG TTTTATTATC AGCGTGTTTA 
CATTATAACA TACATCACCG ACAGGATATA TTAAGTTCGA AGAACACTGC CTCTCCTACA 
GTGGGATTAG ACAGCGCCAT TGTTGATAAA ATCATTTTTG GTCATGAGCT TAACCAATCA 
TATTGTTTAA ATTCCATCGA TGAGGTGGAA AAAGAAATAT TAAACCGTTA TGACATTAAG 
AGGGAAAGTT CTTTTATCAT TAGCGCAGAG AACTACATAG CTCCAATAAT TGGCGAATGT 
AGACATGATT TCAACGCTGT GGTTATCTGT GAATATGATA AAAAACCATA TGTACAATTC 
ATTGATTCTT GGAAAACATC CAACATACTT CCTAGCTTAC AAGAAATAAA AAAACACTTC 
TCATCATCAG GGGAATTTTA TGTCAGGGCT TATGATGAAA AACACGATTG A
 
Protein sequence
MRVSGSASSQ DIISRINSKN INNNDSNEVK RIKDALCIES KERILYPQNL SRDNLKQMAR 
YVNNTYVHYS GNCVLLSACL HYNIHHRQDI LSSKNTASPT VGLDSAIVDK IIFGHELNQS 
YCLNSIDEVE KEILNRYDIK RESSFIISAE NYIAPIIGEC RHDFNAVVIC EYDKKPYVQF 
IDSWKTSNIL PSLQEIKKHF SSSGEFYVRA YDEKHD