Gene SeD_A4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4998 
Symbolrob 
ID6872179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4828153 
End bp4829022 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID642787867 
Productright origin-binding protein 
Protein accessionYP_002218457 
Protein GI198245731 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG CTGGCATAAT TCGCGACCTG TTAATCTGGC TGGAAGGTCA TCTGGATCAG 
CCGCTGTCAC TTGACAATGT GGCGGCAAAA GCAGGCTATT CCAAGTGGCA CCTGCAGAGA 
ATGTTTAAGG ACGTGACGGG CCACGCCATT GGCGCTTACA TCCGCGCCCG TCGTTTATCG 
AAATCAGCAG TGGCGCTGCG TTTGACCGCG CGTCCAATTC TGGATATTGC TCTTCAGTAC 
CGCTTCGATT CTCAGCAAAC CTTTACGCGC GCCTTTAAGA AACAGTTTTC CCAGACGCCA 
GCGCTGTATC GTCGCTCCTC GGAATGGAGC GCCTTTGGCA TTCGCCCGCC ATTACGGCTG 
GGCGAGTTTA CCGTGCCGGA ACATCAGTTC GTTACGCTGG AAGATACGCC GCTCCTTGGC 
GTCACGCAGA GCTATTCCTG CTCGCTGGAA CAGATTTCCG ACTTCCGCCA CGAAATGCGC 
GTGCAATTCT GGCATGATTT CCTCGGTCAT TCGCCAACTA TTCCGCCAGT GCTTTATGGG 
CTTAATGAAA CGCGCCCCAG CATGGAGAAA GACGATGAGC AGGAAGTATT CTATACCACC 
GCACTGCCGC AAGAGCAGGC CGATGGCTAT GTTCAGTCGG CGCATCCTGT GCTGTTGCAG 
GGCGGTGAAT ACGTCATGTT CACCTATGAA GGGTTAGGAA CCGGCGTGCA GGATTTTATC 
CTGACCGTTT ACGGCACCTG TATGCCAATG CTGAATCTGA CCCGTCGTAA AGGGCAGGAT 
ATAGAGCGAT ACTATCCGTC AGAAGATACC AAAACCGGCG ATCGCCCTAT CAACCTGCGC 
TGCGAATTTC TGATCCCGAT TCGTCGTTAA
 
Protein sequence
MDQAGIIRDL LIWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GAYIRARRLS 
KSAVALRLTA RPILDIALQY RFDSQQTFTR AFKKQFSQTP ALYRRSSEWS AFGIRPPLRL 
GEFTVPEHQF VTLEDTPLLG VTQSYSCSLE QISDFRHEMR VQFWHDFLGH SPTIPPVLYG 
LNETRPSMEK DDEQEVFYTT ALPQEQADGY VQSAHPVLLQ GGEYVMFTYE GLGTGVQDFI 
LTVYGTCMPM LNLTRRKGQD IERYYPSEDT KTGDRPINLR CEFLIPIRR